MGE detailed information
MGE type: Genomic_island MGE length: 37058 bp
Accession: NZ_CP117365 Location: 3628571..3665628 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM089 Replicon: chromosome
Accession: NZ_CP117365 Location: 3628571..3665628 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP78_RS17820 () | 3624205..3626647 | + | 2443 | Protein_3485 | acyl-CoA dehydrogenase FadE | - |
| PQP78_RS17825 () | 3626756..3627523 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQP78_RS17830 () | 3627833..3628240 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP78_RS17835 () | 3628571..3629290 | + | 720 | WP_000787612.1 | Outer membrane protein PagN | VF |
| PQP78_RS17840 () | 3629294..3629509 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQP78_RS17845 () | 3629629..3630576 | - | 948 | WP_000970503.1 | LysR family transcriptional regulator | - |
| PQP78_RS17850 () | 3631070..3631310 | - | 241 | Protein_3491 | PerC family transcriptional regulator | - |
| PQP78_RS17855 () | 3631393..3632214 | - | 822 | WP_000119374.1 | polysaccharide deacetylase family protein | - |
| PQP78_RS17860 () | 3632622..3633092 | - | 471 | WP_000266933.1 | hypothetical protein | VF |
| PQP78_RS17865 () | 3633114..3635624 | - | 2511 | WP_000669326.1 | F1 capsule-anchoring protein | VF |
| PQP78_RS17870 () | 3635648..3636388 | - | 741 | WP_000691917.1 | Chaperone protein caf1M | VF |
| PQP78_RS17875 () | 3636463..3636960 | - | 498 | WP_000789647.1 | hypothetical protein | - |
| PQP78_RS17880 () | 3637092..3637586 | - | 495 | WP_000800125.1 | hypothetical protein | - |
| PQP78_RS17885 () | 3638387..3639088 | - | 702 | Protein_3498 | integrase core domain-containing protein | - |
| PQP78_RS17890 () | 3639141..3639389 | + | 249 | WP_023165496.1 | SymE family type I addiction module toxin | - |
| PQP78_RS17895 () | 3639521..3639799 | - | 279 | WP_020924058.1 | hypothetical protein | - |
| PQP78_RS17900 () | 3640116..3640583 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| PQP78_RS17905 () | 3641456..3641689 | - | 234 | WP_124084119.1 | hypothetical protein | - |
| - | 3641866..3642288 | - | 423 | - | - | Antitoxin Detail |
| PQP78_RS17910 () | 3642023..3642298 | + | 276 | WP_000994228.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP78_RS17915 () | 3642351..3642833 | - | 483 | WP_001286803.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQP78_RS17920 () | 3643350..3643796 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQP78_RS17925 () | 3643790..3647869 | - | 4080 | WP_000272670.1 | polymorphic toxin type 47 domain-containing protein | - |
| PQP78_RS17930 () | 3647888..3648334 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| PQP78_RS17935 () | 3648358..3650547 | - | 2190 | WP_000011512.1 | hypothetical protein | VF |
| PQP78_RS17940 () | 3650944..3651465 | - | 522 | Protein_3509 | DUF2778 domain-containing protein | - |
| PQP78_RS17945 () | 3651489..3651905 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQP78_RS17950 () | 3651902..3651997 | - | 96 | Protein_3511 | cytoplasmic protein | - |
| PQP78_RS17955 () | 3652033..3652494 | - | 462 | WP_001670388.1 | hypothetical protein | - |
| PQP78_RS17960 () | 3652479..3652949 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQP78_RS17965 () | 3652992..3653759 | - | 768 | WP_001254134.1 | TagF domain-containing protein | - |
| PQP78_RS17970 () | 3653759..3657628 | - | 3870 | WP_001168959.1 | hypothetical protein | VF |
| PQP78_RS17975 () | 3657662..3658093 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| PQP78_RS17980 () | 3658295..3659068 | - | 774 | WP_000976550.1 | Rap1a/Tai family immunity protein | - |
| PQP78_RS17985 () | 3659073..3660377 | - | 1305 | WP_000132480.1 | Peptidoglycan-associated lipoprotein | VF |
| PQP78_RS17990 () | 3660374..3661717 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQP78_RS17995 () | 3661721..3662257 | - | 537 | WP_001670385.1 | hypothetical protein | VF |
| PQP78_RS18000 () | 3662324..3662809 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PQP78_RS18005 () | 3662952..3663335 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQP78_RS18010 () | 3663320..3663805 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQP78_RS18015 () | 3663848..3664040 | - | 193 | Protein_3524 | type VI secretion system lipoprotein TssJ | - |
| PQP78_RS18020 () | 3664108..3664593 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PQP78_RS18025 () | 3664830..3665255 | - | 426 | WP_001171576.1 | hypothetical protein | - |
| PQP78_RS18030 () | 3665227..3665628 | - | 402 | WP_001147175.1 | BPSL0067 family protein | - |
| PQP78_RS18035 () | 3665681..3667189 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQP78_RS18040 () | 3667213..3667755 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| PQP78_RS18045 () | 3667855..3670494 | - | 2640 | WP_000449797.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|