MGE detailed information
MGE type: Conjugative plasmid MGE length: 86233 bp
Accession: NZ_CP117350 Location: 1..86233 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: plasmid pRM101_2
Accession: NZ_CP117350 Location: 1..86233 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: plasmid pRM101_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ11_RS24210 (1) | 1..1032 | + | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| PQQ11_RS24215 (2101) | 2101..2610 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| PQQ11_RS24220 (2666) | 2666..3268 | - | 603 | WP_000517692.1 | ProQ/FINO family protein | - |
| PQQ11_RS24225 (3622) | 3622..4968 | + | 1347 | WP_001132033.1 | protein YagA | - |
| PQQ11_RS24230 (5247) | 5247..7127 | + | 1881 | WP_274898317.1 | colicin Ia central receptor-binding domain-containing protein | - |
| PQQ11_RS24235 (7149) | 7149..7484 | - | 336 | WP_262940569.1 | colicin E1 immunity protein | - |
| PQQ11_RS24240 (7613) | 7613..7960 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| PQQ11_RS24245 (7978) | 7978..8568 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| PQQ11_RS24250 (8568) | 8568..8825 | - | 258 | WP_001542562.1 | hypothetical protein | - |
| PQQ11_RS24255 (9394) | 9394..9807 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| PQQ11_RS24260 (9809) | 9809..10588 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| PQQ11_RS24265 (10768) | 10768..11412 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PQQ11_RS24270 (11499) | 11499..11807 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| PQQ11_RS24275 (12221) | 12221..13201 | + | 981 | WP_274898319.1 | plasmid segregation protein ParM | - |
| PQQ11_RS24280 (13194) | 13194..13610 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PQQ11_RS24285 (13612) | 13612..14886 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| PQQ11_RS24290 (14886) | 14886..15323 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQQ11_RS24295 (15320) | 15320..15568 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PQQ11_RS24300 (15986) | 15986..16888 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| PQQ11_RS24305 (16885) | 16885..17196 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| PQQ11_RS24310 (17272) | 17272..17955 | + | 684 | WP_000086147.1 | DNA methylase | - |
| PQQ11_RS24315 (17956) | 17956..18177 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| PQQ11_RS24320 (18191) | 18191..18625 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| PQQ11_RS24325 (18671) | 18671..19447 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| PQQ11_RS24330 (19859) | 19859..20284 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| PQQ11_RS24335 (20331) | 20331..20753 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| PQQ11_RS24340 (20750) | 20750..20941 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PQQ11_RS24345 (21012) | 21012..21326 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| PQQ11_RS24350 (21710) | 21710..22237 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| PQQ11_RS24355 (22295) | 22295..22528 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| PQQ11_RS24360 (22587) | 22587..24545 | + | 1959 | WP_001145487.1 | ParB/RepB/Spo0J family partition protein | - |
| PQQ11_RS24365 (24600) | 24600..25034 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| PQQ11_RS24370 (25031) | 25031..25750 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| PQQ11_RS24375 (25747) | 25747..26343 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| PQQ11_RS24380 (26806) | 26806..27306 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| PQQ11_RS24385 (28035) | 28035..28469 | + | 435 | WP_274898322.1 | post-segregation killing protein PndC | - |
| PQQ11_RS24390 (28563) | 28563..28829 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PQQ11_RS24395 (28894) | 28894..29784 | + | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| PQQ11_RS24400 (29784) | 29784..30029 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| PQQ11_RS24405 (30060) | 30060..30311 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| PQQ11_RS24410 (30892) | 30892..31740 | + | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| PQQ11_RS24415 (31826) | 31826..32161 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PQQ11_RS24420 (32395) | 32395..32727 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| PQQ11_RS24425 (32738) | 32738..35437 | + | 2700 | WP_010891268.1 | hypothetical protein | Relaxase |
| PQQ11_RS24430 (35474) | 35474..37765 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| PQQ11_RS24435 (37758) | 37758..38828 | - | 1071 | WP_274898323.1 | IncI1-type conjugal transfer protein TrbB | - |
| PQQ11_RS24440 (38847) | 38847..40055 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (40235) | 40235..40297 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40235) | 40235..40297 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40235) | 40235..40297 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40235) | 40235..40297 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| PQQ11_RS24445 (40347) | 40347..40499 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| PQQ11_RS24450 (40571) | 40571..40822 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| PQQ11_RS24455 (41321) | 41321..41416 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| PQQ11_RS24460 (41481) | 41481..41657 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| PQQ11_RS24465 (42049) | 42049..42258 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| PQQ11_RS24470 (42330) | 42330..42980 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PQQ11_RS24475 (43054) | 43054..45222 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| PQQ11_RS24480 (45319) | 45319..45903 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| PQQ11_RS24485 (45932) | 45932..47134 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| PQQ11_RS24490 (47101) | 47101..47715 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| PQQ11_RS24495 (47715) | 47715..50759 | - | 3045 | WP_274898310.1 | IncI1-type conjugal transfer protein TraU | - |
| PQQ11_RS24500 (50849) | 50849..51649 | - | 801 | WP_274898311.1 | IncI1-type conjugal transfer protein TraT | - |
| PQQ11_RS24505 (51633) | 51633..51821 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| PQQ11_RS24510 (51885) | 51885..52289 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| PQQ11_RS24515 (52340) | 52340..52867 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| PQQ11_RS24520 (52867) | 52867..53571 | - | 705 | WP_274898312.1 | IncI1-type conjugal transfer protein TraP | - |
| PQQ11_RS24525 (53571) | 53571..54860 | - | 1290 | WP_001272000.1 | conjugal transfer protein TraO | - |
| PQQ11_RS24530 (54863) | 54863..55846 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| PQQ11_RS24535 (55857) | 55857..56549 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| PQQ11_RS24540 (56546) | 56546..56893 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| PQQ11_RS24545 (56911) | 56911..60678 | - | 3768 | WP_001141541.1 | DUF5710 domain-containing protein | - |
| PQQ11_RS24550 (60768) | 60768..61319 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| PQQ11_RS24555 (61334) | 61334..61624 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| PQQ11_RS24560 (61621) | 61621..62769 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| PQQ11_RS24565 (62766) | 62766..63584 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| PQQ11_RS24570 (63581) | 63581..64039 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| PQQ11_RS24575 (64434) | 64434..65018 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| PQQ11_RS24580 (65078) | 65078..66280 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| PQQ11_RS24585 (66366) | 66366..67190 | - | 825 | WP_001238929.1 | conjugal transfer protein TraE | - |
| PQQ11_RS24590 (67341) | 67341..68493 | - | 1153 | Protein_76 | site-specific integrase | - |
| PQQ11_RS24595 (68492) | 68492..68791 | + | 300 | WP_274898313.1 | hypothetical protein | - |
| PQQ11_RS24600 (69972) | 69972..71204 | - | 1233 | WP_274898314.1 | hypothetical protein | VF |
| PQQ11_RS24605 (71204) | 71204..71860 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| PQQ11_RS24610 (71845) | 71845..72363 | - | 519 | WP_236920224.1 | lytic transglycosylase domain-containing protein | - |
| PQQ11_RS24615 (72414) | 72414..73028 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| PQQ11_RS24620 (73046) | 73046..74142 | - | 1097 | Protein_82 | hypothetical protein | VF |
| PQQ11_RS24625 (74155) | 74155..75708 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| PQQ11_RS24630 (75719) | 75719..76171 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| PQQ11_RS24635 (76158) | 76158..77453 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| PQQ11_RS24640 (77446) | 77446..79128 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| PQQ11_RS24645 (79142) | 79142..79579 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| PQQ11_RS24650 (79579) | 79579..80646 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| PQQ11_RS24655 (81270) | 81270..81566 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| PQQ11_RS24660 (81742) | 81742..81996 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| PQQ11_RS24665 (82466) | 82466..82708 | - | 243 | WP_274898316.1 | hypothetical protein | - |
| PQQ11_RS24670 (82881) | 82881..83564 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| PQQ11_RS24675 (83818) | 83818..84351 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| PQQ11_RS24680 (84793) | 84793..85080 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| PQQ11_RS24685 (85118) | 85118..85276 | - | 159 | Protein_95 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|