MGE detailed information
MGE type: Genomic_island MGE length: 43570 bp
Accession: NZ_CP117348 Location: 3635633..3679202 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Accession: NZ_CP117348 Location: 3635633..3679202 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ11_RS17820 () | 3632136..3632903 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ11_RS17825 () | 3633213..3633620 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ11_RS17830 () | 3633951..3634670 | + | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| PQQ11_RS17835 () | 3634674..3634862 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| PQQ11_RS17840 () | 3634898..3635031 | + | 134 | Protein_3488 | transposase | - |
| PQQ11_RS17845 () | 3635633..3636250 | - | 618 | WP_000241747.1 | protein TioA | - |
| PQQ11_RS17850 () | 3636390..3636845 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| PQQ11_RS17855 () | 3636978..3638057 | - | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| PQQ11_RS17860 () | 3638080..3640767 | - | 2688 | WP_000092517.1 | hypothetical protein | VF |
| PQQ11_RS17865 () | 3640876..3641394 | - | 519 | WP_274897927.1 | CFA/I fimbrial subunit B | VF |
| PQQ11_RS17870 () | 3641502..3642212 | - | 711 | WP_001009508.1 | hypothetical protein | VF |
| PQQ11_RS17875 () | 3643248..3643805 | + | 558 | Protein_3495 | IS21 family transposase ISEc62 | Transposase |
| PQQ11_RS17880 () | 3643845..3644031 | - | 187 | Protein_3496 | IS3 family transposase IS1351 | Transposase |
| PQQ11_RS17885 () | 3644112..3644231 | - | 120 | Protein_3497 | hypothetical protein | - |
| PQQ11_RS17890 () | 3644351..3645298 | - | 948 | WP_000970298.1 | LysR substrate-binding domain-containing protein | - |
| PQQ11_RS17895 () | 3645790..3646027 | - | 238 | Protein_3499 | PerC family transcriptional regulator | - |
| PQQ11_RS17900 () | 3646110..3646931 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQQ11_RS17905 () | 3647339..3647809 | - | 471 | WP_023170994.1 | AfaD family invasin | - |
| PQQ11_RS17910 () | 3647831..3650341 | - | 2511 | WP_023170995.1 | F1 capsule-anchoring protein | VF |
| PQQ11_RS17915 () | 3650365..3651105 | - | 741 | WP_023170996.1 | Chaperone protein caf1M | VF |
| PQQ11_RS17920 () | 3651180..3651677 | - | 498 | WP_023170997.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ11_RS17925 () | 3652440..3653144 | - | 705 | Protein_3505 | integrase core domain-containing protein | - |
| PQQ11_RS17930 () | 3653197..3653370 | + | 174 | WP_001531381.1 | hypothetical protein | - |
| PQQ11_RS17935 () | 3653435..3653902 | - | 468 | WP_001284951.1 | Imm42 family immunity protein | - |
| PQQ11_RS17940 () | 3653895..3654203 | - | 309 | WP_165488057.1 | hypothetical protein | - |
| PQQ11_RS17945 () | 3654194..3654331 | - | 138 | WP_231391191.1 | hypothetical protein | - |
| - | 3654416..3654826 | - | 411 | - | - | Antitoxin Detail |
| PQQ11_RS17950 () | 3654573..3654836 | + | 264 | WP_000994215.1 | hypothetical protein | Toxin Detail |
| PQQ11_RS17955 () | 3654883..3655317 | - | 435 | WP_000789494.1 | hypothetical protein | - |
| PQQ11_RS17960 () | 3655314..3659114 | - | 3801 | Protein_3512 | RHS repeat-associated core domain-containing protein | - |
| PQQ11_RS17965 () | 3659224..3660428 | + | 1205 | Protein_3513 | IS4-like element ISVsa5 family transposase | - |
| PQQ11_RS17970 () | 3660443..3661354 | - | 912 | Protein_3514 | type IV secretion protein Rhs | - |
| PQQ11_RS17975 () | 3661370..3661828 | - | 459 | WP_000186513.1 | DcrB-related protein | - |
| PQQ11_RS17980 () | 3661888..3664119 | - | 2232 | WP_000011513.1 | hypothetical protein | VF |
| PQQ11_RS17985 () | 3664516..3665037 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQQ11_RS17990 () | 3665061..3665477 | - | 417 | WP_000759642.1 | DUF2195 family protein | - |
| PQQ11_RS17995 () | 3665474..3665569 | - | 96 | Protein_3519 | hypothetical protein | - |
| PQQ11_RS18000 () | 3665605..3666066 | - | 462 | WP_001684272.1 | hypothetical protein | - |
| PQQ11_RS18005 () | 3666051..3666521 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQQ11_RS18010 () | 3666564..3667331 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| PQQ11_RS18015 () | 3667331..3671200 | - | 3870 | WP_274897929.1 | hypothetical protein | VF |
| PQQ11_RS18020 () | 3671234..3671665 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| PQQ11_RS18025 () | 3671868..3672641 | - | 774 | WP_000976547.1 | Rap1a/Tai family immunity protein | - |
| PQQ11_RS18030 () | 3672646..3673950 | - | 1305 | WP_000132479.1 | Peptidoglycan-associated lipoprotein | VF |
| PQQ11_RS18035 () | 3673947..3675290 | - | 1344 | WP_274897930.1 | hypothetical protein | VF |
| PQQ11_RS18040 () | 3675294..3675830 | - | 537 | WP_001682196.1 | hypothetical protein | VF |
| PQQ11_RS18045 () | 3675898..3676383 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PQQ11_RS18050 () | 3676526..3676909 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQQ11_RS18055 () | 3676894..3677379 | - | 486 | WP_001081551.1 | type VI secretion system amidase effector protein Tae4 | - |
| PQQ11_RS18060 () | 3677422..3677615 | - | 194 | Protein_3532 | type VI secretion system lipoprotein TssJ | - |
| PQQ11_RS18065 () | 3677682..3678167 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PQQ11_RS18070 () | 3678404..3678829 | - | 426 | WP_001171573.1 | hypothetical protein | - |
| PQQ11_RS18075 () | 3678801..3679202 | - | 402 | WP_001147175.1 | BPSL0067 family protein | - |
| PQQ11_RS18080 () | 3679255..3680763 | - | 1509 | WP_000013889.1 | type VI secretion system contractile sheath large subunit | - |
| PQQ11_RS18085 () | 3680787..3681329 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQQ11_RS18090 () | 3681429..3684068 | - | 2640 | WP_000449783.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|