MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117343 Location: 4193840..4196943 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: chromosome
Accession: NZ_CP117343 Location: 4193840..4196943 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP76_RS20635 (4189129) | 4189129..4189575 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQP76_RS20640 (4189572) | 4189572..4192016 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQP76_RS20645 (4192033) | 4192033..4192773 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQP76_RS20650 (4192895) | 4192895..4193425 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQP76_RS20655 (4193748) | 4193748..4194881 | + | 1134 | Protein_4045 | IS3 family transposase | - |
| PQP76_RS20660 (4194913) | 4194913..4195053 | - | 141 | Protein_4046 | Arm DNA-binding domain-containing protein | - |
| PQP76_RS20665 (4195459) | 4195459..4195767 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQP76_RS20670 (4195770) | 4195770..4196009 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQP76_RS20675 (4196118) | 4196118..4196366 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQP76_RS20680 (4196557) | 4196557..4196988 | - | 432 | Protein_4050 | IS630 family transposase ISEc33 | Transposase |
| PQP76_RS20690 (4197745) | 4197745..4198764 | + | 1020 | WP_274882125.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQP76_RS20695 (4198792) | 4198792..4199322 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQP76_RS20700 (4199539) | 4199539..4200570 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQP76_RS20705 (4200595) | 4200595..4201359 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|