MGE detailed information
MGE type: Prophage MGE length: 102900 bp
Accession: NZ_CP117343 Location: 2644822..2747721 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: chromosome
Accession: NZ_CP117343 Location: 2644822..2747721 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP76_RS12990 () | 2640551..2641009 | + | 459 | WP_000156283.1 | DUF986 family protein | - |
| PQP76_RS12995 () | 2641419..2641985 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PQP76_RS13000 () | 2641982..2642791 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP76_RS13005 () | 2642857..2644602 | - | 1746 | WP_000730323.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQP76_RS13010 () | 2644822..2645031 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP76_RS13015 () | 2645044..2645187 | - | 144 | WP_001675517.1 | DUF2627 domain-containing protein | - |
| PQP76_RS13020 () | 2645836..2646123 | - | 288 | WP_001000659.1 | YebO family protein | - |
| PQP76_RS13025 () | 2646194..2646337 | - | 144 | WP_000847421.1 | PhoP/PhoQ regulator MgrB | - |
| PQP76_RS13030 () | 2646495..2646734 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQP76_RS13035 () | 2646946..2647737 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP76_RS13040 () | 2647913..2649286 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| PQP76_RS13045 () | 2649334..2650215 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PQP76_RS13050 () | 2650408..2652456 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| PQP76_RS13055 () | 2652476..2653162 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQP76_RS13060 () | 2653260..2653757 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP76_RS13065 () | 2653886..2655169 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP76_RS13070 () | 2655138..2657771 | + | 2634 | WP_001752430.1 | Intermembrane transport protein YebT | VF |
| PQP76_RS13075 () | 2657849..2659288 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP76_RS13080 () | 2659406..2659642 | + | 237 | WP_024131108.1 | YebV family protein | - |
| PQP76_RS13085 () | 2659753..2659944 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQP76_RS13090 () | 2659963..2660613 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| PQP76_RS13095 () | 2660837..2661001 | - | 165 | WP_001134856.1 | membrane protein | - |
| PQP76_RS13100 () | 2661286..2662008 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQP76_RS13105 () | 2662692..2663033 | + | 342 | WP_001752424.1 | DUF1398 family protein | - |
| PQP76_RS13110 () | 2663415..2663891 | + | 477 | WP_000030946.1 | hypothetical protein | - |
| PQP76_RS13115 () | 2664264..2664683 | - | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP76_RS13120 () | 2665053..2665322 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP76_RS13125 () | 2665488..2665628 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP76_RS13130 () | 2665774..2666968 | - | 1195 | Protein_2570 | IS256 family transposase IS285 | Transposase |
| PQP76_RS24740 () | 2667344..2667460 | + | 117 | WP_231919481.1 | integrase | - |
| PQP76_RS13140 () | 2668756..2669671 | + | 916 | Protein_2572 | DMT family transporter | - |
| PQP76_RS13145 () | 2669804..2669962 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP76_RS13150 () | 2669972..2670586 | + | 615 | WP_000848073.1 | disulfide bond formation protein B | - |
| PQP76_RS13155 () | 2670913..2671080 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP76_RS13160 () | 2671734..2671859 | - | 126 | WP_001574229.1 | hypothetical protein | - |
| PQP76_RS13165 () | 2671859..2672038 | + | 180 | Protein_2577 | IS3 family transposase | - |
| PQP76_RS13170 () | 2672427..2672627 | + | 201 | WP_001751604.1 | PagK family vesicle-borne virulence factor | - |
| PQP76_RS13175 () | 2672724..2673199 | - | 476 | Protein_2579 | tail fiber assembly protein | - |
| PQP76_RS13180 () | 2673216..2673551 | - | 336 | Protein_2580 | macro domain-containing protein | - |
| PQP76_RS13185 () | 2673766..2674031 | - | 266 | Protein_2581 | DUF1441 family protein | - |
| PQP76_RS13190 () | 2674086..2674277 | + | 192 | WP_001034751.1 | hypothetical protein | - |
| PQP76_RS13195 () | 2674342..2674509 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP76_RS13200 () | 2674766..2675299 | - | 534 | WP_000055326.1 | DUF2514 domain-containing protein | - |
| PQP76_RS13205 () | 2675296..2675544 | - | 249 | Protein_2585 | glycoside hydrolase family 19 protein | - |
| PQP76_RS13210 () | 2675692..2676687 | + | 996 | Protein_2586 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP76_RS13215 () | 2676717..2677796 | + | 1080 | WP_000087644.1 | hypothetical protein ; Integrase | Integrase |
| PQP76_RS13220 () | 2678750..2679550 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| PQP76_RS13225 () | 2679579..2679820 | - | 242 | Protein_2589 | recombinase family protein | - |
| PQP76_RS13230 () | 2680030..2680752 | + | 723 | WP_000161701.1 | Guanine nucleotide exchange factor SopE | VF |
| PQP76_RS13235 () | 2680954..2681523 | - | 570 | WP_000143180.1 | tail fiber assembly protein | - |
| PQP76_RS13240 () | 2681523..2683940 | - | 2418 | WP_001574223.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PQP76_RS13245 () | 2683994..2684230 | - | 237 | WP_223229643.1 | hypothetical protein | - |
| PQP76_RS13250 () | 2684275..2685138 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| PQP76_RS13255 () | 2685178..2687627 | - | 2450 | Protein_2595 | host specificity protein J | - |
| PQP76_RS13260 () | 2687699..2688403 | - | 705 | WP_001576012.1 | tail assembly protein | - |
| PQP76_RS13265 () | 2688307..2689038 | - | 732 | WP_000606352.1 | C40 family peptidase | - |
| PQP76_RS13270 () | 2689048..2689743 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| PQP76_RS13275 () | 2689833..2690366 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| PQP76_RS13280 () | 2690483..2690980 | - | 498 | WP_000725268.1 | Attachment invasion locus protein | VF |
| PQP76_RS13285 () | 2691079..2691411 | - | 333 | WP_000978295.1 | phage tail protein | - |
| PQP76_RS13290 () | 2691408..2694395 | - | 2988 | WP_077906652.1 | phage tail tape measure protein | - |
| PQP76_RS13295 () | 2694475..2694804 | - | 330 | WP_010989009.1 | phage tail assembly protein T | - |
| PQP76_RS13300 () | 2694801..2695199 | - | 399 | WP_000478858.1 | phage minor tail protein G | - |
| PQP76_RS13305 () | 2695245..2695994 | - | 750 | WP_000132757.1 | phage tail protein | - |
| PQP76_RS13310 () | 2696006..2696407 | - | 402 | WP_000196703.1 | phage minor tail U family protein | - |
| PQP76_RS13315 () | 2696404..2696970 | - | 567 | WP_000453192.1 | phage tail protein | - |
| PQP76_RS13320 () | 2696951..2697250 | - | 300 | WP_000774239.1 | ATP-binding protein | - |
| PQP76_RS13325 () | 2697243..2697566 | - | 324 | WP_001107908.1 | DUF2190 family protein | - |
| PQP76_RS13330 () | 2697657..2699737 | - | 2081 | Protein_2610 | Clp protease ClpP | - |
| PQP76_RS13335 () | 2699661..2701208 | - | 1548 | WP_001009211.1 | phage portal protein | - |
| PQP76_RS13340 () | 2701205..2701411 | - | 207 | WP_000196190.1 | hypothetical protein | - |
| PQP76_RS13345 () | 2701408..2703546 | - | 2139 | WP_000989241.1 | phage terminase large subunit family protein | - |
| PQP76_RS13350 () | 2703503..2704036 | - | 534 | WP_024139201.1 | DUF1441 family protein | - |
| PQP76_RS13355 () | 2704244..2704723 | - | 480 | WP_001541990.1 | lysis protein | - |
| PQP76_RS13360 () | 2704741..2705193 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| PQP76_RS13365 () | 2705177..2705506 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| PQP76_RS13370 () | 2705782..2706468 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| PQP76_RS13375 () | 2706829..2707278 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| PQP76_RS13380 () | 2707652..2708179 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| PQP76_RS13385 () | 2708273..2708962 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| PQP76_RS13390 () | 2708959..2709095 | - | 137 | Protein_2622 | YlcG family protein | - |
| PQP76_RS13395 () | 2709092..2709232 | - | 141 | Protein_2623 | recombination protein NinG | - |
| PQP76_RS13400 () | 2709316..2709915 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| PQP76_RS13405 () | 2709979..2710197 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| PQP76_RS13410 () | 2710499..2710597 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| PQP76_RS13415 () | 2710916..2712895 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PQP76_RS13420 () | 2713292..2714422 | + | 1131 | WP_000529512.1 | GGDEF domain-containing protein | - |
| PQP76_RS13425 () | 2714709..2715104 | - | 396 | WP_000089417.1 | DUF977 family protein | - |
| PQP76_RS13430 () | 2715117..2715659 | - | 543 | WP_158000546.1 | replication protein P | - |
| PQP76_RS13435 () | 2715571..2716569 | - | 999 | WP_000729536.1 | DUF1376 domain-containing protein | - |
| PQP76_RS13440 () | 2716616..2717110 | - | 495 | WP_001574210.1 | toxin YdaT family protein | - |
| PQP76_RS13445 () | 2717097..2717351 | - | 255 | WP_001033912.1 | helix-turn-helix transcriptional regulator | - |
| PQP76_RS13450 () | 2717450..2717848 | + | 399 | WP_001574209.1 | helix-turn-helix domain-containing protein | - |
| PQP76_RS13455 () | 2718290..2718604 | - | 315 | WP_071591195.1 | hypothetical protein | - |
| PQP76_RS13460 () | 2718866..2719141 | + | 276 | WP_000103933.1 | hypothetical protein | - |
| PQP76_RS13465 () | 2719145..2719351 | + | 207 | WP_000682660.1 | cell division inhibitor protein | - |
| PQP76_RS13470 () | 2719427..2719762 | + | 336 | WP_000799627.1 | hypothetical protein | - |
| PQP76_RS13475 () | 2719903..2722593 | + | 2691 | WP_000023732.1 | exodeoxyribonuclease VIII | - |
| PQP76_RS13480 () | 2722586..2723416 | + | 831 | WP_024139186.1 | recombination protein RecT | - |
| PQP76_RS13485 () | 2723463..2723648 | + | 186 | WP_000280163.1 | DUF1187 family protein | - |
| PQP76_RS13490 () | 2723747..2724175 | + | 429 | WP_000743301.1 | hypothetical protein | - |
| PQP76_RS13495 () | 2724236..2724514 | + | 279 | WP_001675651.1 | excisionase | - |
| PQP76_RS13500 () | 2724489..2725568 | + | 1080 | WP_000087638.1 | hypothetical protein ; Integrase | Integrase |
| - | 2725706..2725851 | + | 146 | - | - | Antitoxin Detail |
| - | 2725708..2725811 | - | 104 | - | - | Toxin Detail |
| PQP76_RS13505 () | 2725951..2726304 | - | 354 | WP_000722368.1 | YebY family protein | - |
| PQP76_RS13510 () | 2726321..2727196 | - | 876 | WP_000979703.1 | copper homeostasis membrane protein CopD | - |
| PQP76_RS13515 () | 2727197..2727571 | - | 375 | WP_001751617.1 | CopC domain-containing protein YobA | - |
| PQP76_RS13520 () | 2727709..2727939 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP76_RS13525 () | 2728047..2728703 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQP76_RS13530 () | 2728727..2729425 | + | 699 | WP_274881929.1 | exodeoxyribonuclease X | - |
| PQP76_RS13535 () | 2729462..2731513 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| PQP76_RS13540 () | 2731726..2732385 | - | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| PQP76_RS13545 () | 2732479..2732832 | - | 354 | WP_001042123.1 | protein YebF | - |
| PQP76_RS13550 () | 2732900..2733190 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP76_RS13555 () | 2733321..2734499 | + | 1179 | WP_000173430.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP76_RS13560 () | 2734599..2735240 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP76_RS13565 () | 2735278..2737089 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PQP76_RS13570 () | 2737324..2738799 | - | 1476 | WP_000301704.1 | glucose-6-phosphate dehydrogenase | - |
| PQP76_RS13575 () | 2739141..2740010 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| PQP76_RS13580 () | 2740134..2741576 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| PQP76_RS13585 () | 2741649..2742620 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PQP76_RS13590 () | 2742737..2744056 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| PQP76_RS13595 () | 2744072..2745016 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PQP76_RS13600 () | 2745095..2745850 | + | 756 | WP_000203013.1 | Zinc import ATP-binding protein ZnuC | VF |
| PQP76_RS13605 () | 2745847..2746632 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PQP76_RS13610 () | 2746711..2747721 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PQP76_RS13615 () | 2747730..2748341 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PQP76_RS13620 () | 2748701..2749393 | - | 693 | WP_001675835.1 | hypothetical protein | - |
| PQP76_RS13625 () | 2749602..2750198 | + | 597 | WP_000716751.1 | YebB family permuted papain-like enzyme | - |
| PQP76_RS13630 () | 2750298..2751794 | - | 1497 | WP_000974701.1 | substrate-binding domain-containing protein | - |
| PQP76_RS13635 () | 2751825..2752346 | - | 522 | WP_000022510.1 | crossover junction endodeoxyribonuclease RuvC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|