MGE detailed information
MGE type: Conjugative plasmid MGE length: 86676 bp
Accession: NZ_CP117341 Location: 1..86676 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM111 Replicon: plasmid pRM111_1
Accession: NZ_CP117341 Location: 1..86676 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM111 Replicon: plasmid pRM111_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ02_RS23715 (PQQ02_23715) | 2040..2474 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQQ02_RS23720 (PQQ02_23720) | 2492..3607 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQQ02_RS23725 (PQQ02_23725) | 3876..4484 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQQ02_RS23730 (PQQ02_23730) | 4489..5010 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQQ02_RS23735 (PQQ02_23735) | 5013..5534 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQQ02_RS23740 (PQQ02_23740) | 5631..6104 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQQ02_RS23745 (PQQ02_23745) | 6115..6408 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQQ02_RS23750 (PQQ02_23750) | 6413..7267 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| PQQ02_RS23755 (PQQ02_23755) | 7267..8226 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQQ02_RS23760 (PQQ02_23760) | 8242..9102 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQQ02_RS23765 (PQQ02_23765) | 9136..9564 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQQ02_RS23770 (PQQ02_23770) | 9621..9980 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQQ02_RS23775 (PQQ02_23775) | 9980..10426 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQQ02_RS23780 (PQQ02_23780) | 10423..10941 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQQ02_RS23785 (PQQ02_23785) | 10941..11171 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQQ02_RS23790 (PQQ02_23790) | 11158..12015 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQQ02_RS23795 (PQQ02_23795) | 12246..12773 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQQ02_RS23800 (PQQ02_23800) | 12831..13103 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQQ02_RS23805 (PQQ02_23805) | 13191..13484 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQQ02_RS23810 (PQQ02_23810) | 13511..13813 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQQ02_RS23815 (PQQ02_23815) | 13818..14168 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ02_RS23820 (PQQ02_23820) | 14331..14879 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQQ02_RS23825 (PQQ02_23825) | 15220..15414 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQQ02_RS23830 (PQQ02_23830) | 15425..15796 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQQ02_RS23835 (PQQ02_23835) | 15789..16259 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQQ02_RS23840 (PQQ02_23840) | 16274..16609 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQQ02_RS23845 (PQQ02_23845) | 16706..17194 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQQ02_RS23850 (PQQ02_23850) | 17197..17694 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQQ02_RS23855 (PQQ02_23855) | 17909..18613 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ02_RS23860 (PQQ02_23860) | 18920..19003 | + | 84 | Protein_30 | IS6 family transposase IS15 | Transposase |
| PQQ02_RS23865 (PQQ02_23865) | 19066..19770 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ02_RS23870 (PQQ02_23870) | 19776..19916 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQQ02_RS23875 (PQQ02_23875) | 20402..21139 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQQ02_RS23880 (PQQ02_23880) | 21136..21360 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQQ02_RS23885 (PQQ02_23885) | 21571..23064 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQQ02_RS23890 (PQQ02_23890) | 23095..23979 | + | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| PQQ02_RS23895 (PQQ02_23895) | 24196..25410 | + | 1215 | WP_012728216.1 | Bicyclomycin resistance protein | ARG |
| PQQ02_RS23900 (PQQ02_23900) | 25438..25743 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| PQQ02_RS23905 (PQQ02_23905) | 25855..26043 | + | 189 | Protein_39 | IS91 family transposase | - |
| PQQ02_RS23910 (PQQ02_23910) | 26010..27209 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| PQQ02_RS23915 (PQQ02_23915) | 27315..27965 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQQ02_RS23920 (PQQ02_23920) | 27997..28239 | - | 243 | WP_000844627.1 | transposase | - |
| PQQ02_RS23925 (PQQ02_23925) | 28545..29381 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQQ02_RS23930 (PQQ02_23930) | 29381..30184 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQQ02_RS23935 (PQQ02_23935) | 30245..31060 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQQ02_RS23940 (PQQ02_23940) | 31367..31678 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQQ02_RS23945 (PQQ02_23945) | 31852..32637 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| PQQ02_RS23950 (PQQ02_23950) | 32641..33822 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQQ02_RS23955 (PQQ02_23955) | 33871..34143 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQQ02_RS23960 (PQQ02_23960) | 34196..34831 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQQ02_RS23965 (PQQ02_23965) | 34923..35066 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQQ02_RS23970 (PQQ02_23970) | 35393..35770 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| PQQ02_RS23975 (PQQ02_23975) | 35763..36044 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQQ02_RS23980 (PQQ02_23980) | 36019..36693 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQQ02_RS23985 (PQQ02_23985) | 36686..37192 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQQ02_RS23990 (PQQ02_23990) | 37198..37509 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQQ02_RS23995 (PQQ02_23995) | 37518..38018 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQQ02_RS24000 (PQQ02_24000) | 38022..39449 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQQ02_RS24005 (PQQ02_24005) | 39449..40105 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQQ02_RS24010 (PQQ02_24010) | 40161..40778 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQQ02_RS24015 (PQQ02_24015) | 41011..41289 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQQ02_RS24020 (PQQ02_24020) | 41380..41868 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQQ02_RS24025 (PQQ02_24025) | 41883..44075 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQQ02_RS24030 (PQQ02_24030) | 44075..44308 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQQ02_RS24035 (PQQ02_24035) | 44290..44907 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQQ02_RS24040 (PQQ02_24040) | 45075..48047 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQQ02_RS24045 (PQQ02_24045) | 48044..49909 | + | 1866 | WP_077779971.1 | conjugative transfer system coupling protein TraD | - |
| PQQ02_RS24050 (PQQ02_24050) | 49959..50504 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQQ02_RS24055 (PQQ02_24055) | 50461..51090 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQQ02_RS24060 (PQQ02_24060) | 51100..51546 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| PQQ02_RS24065 (PQQ02_24065) | 51556..51933 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQQ02_RS24070 (PQQ02_24070) | 51933..52595 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQQ02_RS24075 (PQQ02_24075) | 52931..53296 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQQ02_RS24080 (PQQ02_24080) | 53441..53722 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQQ02_RS24085 (PQQ02_24085) | 53719..54345 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQQ02_RS24090 (PQQ02_24090) | 54329..55246 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| PQQ02_RS24095 (PQQ02_24095) | 55246..56559 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| PQQ02_RS24100 (PQQ02_24100) | 56556..57134 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQQ02_RS24105 (PQQ02_24105) | 57138..57530 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQQ02_RS24110 (PQQ02_24110) | 57815..59077 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQQ02_RS24115 (PQQ02_24115) | 59401..60546 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQQ02_RS24120 (PQQ02_24120) | 60640..61221 | + | 582 | WP_058663077.1 | lipocalin family protein | - |
| PQQ02_RS24125 (PQQ02_24125) | 61167..61871 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ02_RS24130 (PQQ02_24130) | 61934..64591 | + | 2658 | Protein_84 | RHS repeat-associated core domain-containing protein | - |
| PQQ02_RS24135 (PQQ02_24135) | 64581..65003 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQQ02_RS24140 (PQQ02_24140) | 65174..65626 | + | 453 | Protein_86 | hypothetical protein | - |
| PQQ02_RS24145 (PQQ02_24145) | 65642..66244 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQQ02_RS24150 (PQQ02_24150) | 66514..66795 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQQ02_RS24155 (PQQ02_24155) | 67094..67630 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQQ02_RS24160 (PQQ02_24160) | 67633..68643 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQQ02_RS24165 (PQQ02_24165) | 68648..69517 | + | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| PQQ02_RS24170 (PQQ02_24170) | 69514..70005 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQQ02_RS24175 (PQQ02_24175) | 70332..71207 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQQ02_RS24180 (PQQ02_24180) | 71352..72392 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| PQQ02_RS24185 (PQQ02_24185) | 72679..74190 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQQ02_RS24190 (PQQ02_24190) | 74301..75341 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQQ02_RS24195 (PQQ02_24195) | 75343..76776 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| PQQ02_RS24200 (PQQ02_24200) | 76789..80403 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQQ02_RS24205 (PQQ02_24205) | 80441..80803 | - | 363 | WP_274891641.1 | permease | - |
| PQQ02_RS24210 (PQQ02_24210) | 81519..81791 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQQ02_RS24215 (PQQ02_24215) | 81791..82324 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQQ02_RS24220 (PQQ02_24220) | 82335..82943 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQQ02_RS24225 (PQQ02_24225) | 82940..83491 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| PQQ02_RS24230 (PQQ02_24230) | 83551..83970 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQQ02_RS24235 (PQQ02_24235) | 83972..84265 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQQ02_RS24240 (PQQ02_24240) | 84282..85265 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQQ02_RS24245 (PQQ02_24245) | 85764..86303 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
| PQQ02_RS24250 (PQQ02_24250) | 86308..86595 | + | 288 | WP_000127321.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|