MGE detailed information
MGE type: Genomic_island MGE length: 11361 bp
Accession: NZ_CP117336 Location: 833664..845024 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Accession: NZ_CP117336 Location: 833664..845024 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP91_RS04000 (829110) | 829110..830208 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQP91_RS04005 (830218) | 830218..831735 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP91_RS04010 (831811) | 831811..832356 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP91_RS04015 (832621) | 832621..833379 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP91_RS04025 (833664) | 833664..834470 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PQP91_RS04030 (834750) | 834750..835001 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| PQP91_RS04035 (835210) | 835210..835437 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP91_RS04040 (835437) | 835437..835835 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP91_RS04045 (836642) | 836642..837178 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| PQP91_RS04050 (837225) | 837225..837857 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP91_RS04055 (838576) | 838576..839157 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| PQP91_RS04060 (839277) | 839277..841766 | + | 2490 | WP_000705504.1 | Outer membrane usher protein PapC | VF |
| PQP91_RS04065 (841807) | 841807..842550 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| PQP91_RS04070 (842547) | 842547..843623 | + | 1077 | WP_000141331.1 | hypothetical protein | - |
| PQP91_RS04075 (843767) | 843767..844279 | + | 513 | WP_000336258.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP91_RS04080 (844266) | 844266..845024 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP91_RS04085 (845234) | 845234..846124 | - | 891 | WP_001747399.1 | nickel/cobalt efflux protein RcnA | - |
| PQP91_RS04090 (846245) | 846245..846517 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP91_RS04095 (846548) | 846548..847777 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PQP91_RS04100 (847919) | 847919..848374 | - | 456 | WP_001574932.1 | multidrug/biocide efflux PACE transporter | - |
| PQP91_RS04105 (848478) | 848478..849341 | + | 864 | WP_001270781.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.008 |