MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117336 Location: 4193905..4197008 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Accession: NZ_CP117336 Location: 4193905..4197008 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM052 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP91_RS20640 (4189194) | 4189194..4189640 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQP91_RS20645 (4189637) | 4189637..4192081 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQP91_RS20650 (4192098) | 4192098..4192838 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQP91_RS20655 (4192960) | 4192960..4193490 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQP91_RS20660 (4193813) | 4193813..4194946 | + | 1134 | Protein_4044 | IS3 family transposase | - |
| PQP91_RS20665 (4194978) | 4194978..4195118 | - | 141 | Protein_4045 | Arm DNA-binding domain-containing protein | - |
| PQP91_RS20670 (4195524) | 4195524..4195832 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQP91_RS20675 (4195835) | 4195835..4196074 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQP91_RS20680 (4196183) | 4196183..4196431 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQP91_RS20685 (4196622) | 4196622..4197053 | - | 432 | Protein_4049 | IS630 family transposase ISEc33 | Transposase |
| PQP91_RS20695 (4197810) | 4197810..4198829 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQP91_RS20700 (4198857) | 4198857..4199387 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQP91_RS20705 (4199604) | 4199604..4200635 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQP91_RS20710 (4200660) | 4200660..4201424 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|