MGE detailed information
MGE type: Genomic_island MGE length: 37141 bp
Accession: NZ_CP117326 Location: 3599094..3636234 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM108 Replicon: chromosome
Accession: NZ_CP117326 Location: 3599094..3636234 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM108 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ05_RS17585 () | 3594726..3597170 | + | 2445 | WP_274895309.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ05_RS17590 () | 3597279..3598046 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ05_RS17595 () | 3598356..3598763 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ05_RS17600 () | 3599094..3599813 | + | 720 | WP_274895310.1 | hypothetical protein | VF |
| PQQ05_RS17605 () | 3599817..3600032 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQQ05_RS17610 () | 3600152..3601099 | - | 948 | WP_000970298.1 | LysR substrate-binding domain-containing protein | - |
| PQQ05_RS17615 () | 3601593..3601833 | - | 241 | Protein_3445 | PerC family transcriptional regulator | - |
| PQQ05_RS17620 () | 3601916..3602737 | - | 822 | WP_000119374.1 | polysaccharide deacetylase family protein | - |
| PQQ05_RS17625 () | 3603145..3603615 | - | 471 | WP_000266933.1 | hypothetical protein | VF |
| PQQ05_RS17630 () | 3603637..3606147 | - | 2511 | WP_274895311.1 | hypothetical protein | VF |
| PQQ05_RS17635 () | 3606171..3606911 | - | 741 | WP_000691917.1 | hypothetical protein | VF |
| PQQ05_RS17640 () | 3606986..3607483 | - | 498 | WP_000789647.1 | hypothetical protein | - |
| PQQ05_RS17645 () | 3607615..3608109 | - | 495 | WP_274895312.1 | hypothetical protein | - |
| PQQ05_RS17650 () | 3608992..3609693 | - | 702 | Protein_3452 | integrase core domain-containing protein | - |
| PQQ05_RS17655 () | 3609746..3609994 | + | 249 | WP_023165496.1 | SymE family type I addiction module toxin | - |
| PQQ05_RS17660 () | 3610126..3610404 | - | 279 | WP_020924058.1 | hypothetical protein | - |
| PQQ05_RS17665 () | 3610721..3611188 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| - | 3612470..3612892 | - | 423 | - | - | Antitoxin Detail |
| PQQ05_RS17670 () | 3612627..3612902 | + | 276 | WP_000994228.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ05_RS17675 () | 3612955..3613437 | - | 483 | WP_001286803.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQQ05_RS17680 () | 3613956..3614402 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQQ05_RS17685 () | 3614396..3618475 | - | 4080 | WP_000272670.1 | polymorphic toxin type 47 domain-containing protein | - |
| PQQ05_RS17690 () | 3618494..3618940 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| PQQ05_RS17695 () | 3618964..3621153 | - | 2190 | WP_000011512.1 | hypothetical protein | VF |
| PQQ05_RS17700 () | 3621550..3622071 | - | 522 | Protein_3462 | DUF2778 domain-containing protein | - |
| PQQ05_RS17705 () | 3622095..3622511 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQQ05_RS17710 () | 3622508..3622603 | - | 96 | Protein_3464 | cytoplasmic protein | - |
| PQQ05_RS17715 () | 3622639..3623100 | - | 462 | WP_001670388.1 | hypothetical protein | - |
| PQQ05_RS17720 () | 3623085..3623555 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQQ05_RS17725 () | 3623598..3624365 | - | 768 | WP_001254134.1 | TagF domain-containing protein | - |
| PQQ05_RS17730 () | 3624365..3628234 | - | 3870 | WP_274895313.1 | hypothetical protein | VF |
| PQQ05_RS17735 () | 3628268..3628699 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| PQQ05_RS17740 () | 3628901..3629674 | - | 774 | WP_000976550.1 | Rap1a/Tai family immunity protein | - |
| PQQ05_RS17745 () | 3629679..3630983 | - | 1305 | WP_000132480.1 | hypothetical protein | VF |
| PQQ05_RS17750 () | 3630980..3632323 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQQ05_RS17755 () | 3632327..3632863 | - | 537 | WP_001670385.1 | hypothetical protein | VF |
| PQQ05_RS17760 () | 3632930..3633415 | - | 486 | WP_000119443.1 | hypothetical protein | VF |
| PQQ05_RS17765 () | 3633558..3633941 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQQ05_RS17770 () | 3633926..3634411 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQQ05_RS17775 () | 3634454..3634646 | - | 193 | Protein_3477 | type VI secretion system lipoprotein TssJ | - |
| PQQ05_RS17780 () | 3634714..3635199 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| PQQ05_RS17785 () | 3635436..3635861 | - | 426 | WP_001171576.1 | hypothetical protein | - |
| PQQ05_RS17790 () | 3635833..3636234 | - | 402 | WP_001147175.1 | BPSL0067 family protein | - |
| PQQ05_RS17795 () | 3636287..3637795 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQQ05_RS17800 () | 3637819..3638361 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| PQQ05_RS17805 () | 3638461..3641100 | - | 2640 | WP_000449797.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|