MGE detailed information
MGE type: Genomic_island MGE length: 35712 bp
Accession: NZ_CP117322 Location: 3609153..3644864 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM001 Replicon: chromosome
Accession: NZ_CP117322 Location: 3609153..3644864 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP82_RS17575 () | 3604709..3607153 | + | 2445 | WP_023209690.1 | acyl-CoA dehydrogenase FadE | - |
| PQP82_RS17580 () | 3607262..3608029 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQP82_RS17585 () | 3608400..3608807 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP82_RS17590 () | 3609153..3609872 | + | 720 | WP_000787603.1 | putative HTH-type transcriptional regulator | VF |
| PQP82_RS17595 () | 3609876..3610090 | - | 215 | Protein_3443 | hypothetical protein | - |
| PQP82_RS17600 () | 3610210..3611157 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP82_RS17605 () | 3611651..3611891 | - | 241 | Protein_3445 | PerC family transcriptional regulator | - |
| PQP82_RS17610 () | 3611974..3612795 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP82_RS17615 () | 3613203..3613673 | - | 471 | WP_023231370.1 | AfaD family invasin | - |
| PQP82_RS17620 () | 3613695..3616205 | - | 2511 | WP_023231369.1 | HTH-type transcriptional dual regulator CecR | VF |
| PQP82_RS17625 () | 3616229..3616969 | - | 741 | WP_000691916.1 | putative dipeptidase PepE | VF |
| PQP82_RS17630 () | 3617044..3617541 | - | 498 | WP_048348967.1 | Saf-pilin pilus formation protein SafA | - |
| PQP82_RS17635 () | 3618290..3618994 | - | 705 | Protein_3451 | integrase core domain-containing protein | - |
| PQP82_RS17640 () | 3619047..3619361 | + | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| PQP82_RS17645 () | 3619428..3619706 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| PQP82_RS17650 () | 3620024..3620491 | - | 468 | WP_023232370.1 | hypothetical protein | - |
| PQP82_RS17655 () | 3621364..3621597 | - | 234 | WP_124741005.1 | hypothetical protein | - |
| - | 3621775..3622187 | - | 413 | - | - | Antitoxin Detail |
| PQP82_RS17660 () | 3621922..3622197 | + | 276 | WP_023232369.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP82_RS17665 () | 3622254..3622586 | - | 333 | WP_001750702.1 | barstar family protein | - |
| PQP82_RS17670 () | 3622586..3627280 | - | 4695 | WP_223124460.1 | RHS repeat-associated core domain-containing protein | - |
| PQP82_RS17675 () | 3627296..3627754 | - | 459 | WP_000186514.1 | DcrB-related protein | - |
| PQP82_RS17680 () | 3627814..3630048 | - | 2235 | WP_023232367.1 | Putative hydrolase YdeN | VF |
| PQP82_RS17685 () | 3630444..3630965 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQP82_RS17690 () | 3630989..3631405 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQP82_RS17695 () | 3631402..3631497 | - | 96 | Protein_3463 | cytoplasmic protein | - |
| PQP82_RS17700 () | 3631533..3631994 | - | 462 | WP_001529547.1 | hypothetical protein | - |
| PQP82_RS17705 () | 3631979..3632449 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQP82_RS17710 () | 3632492..3633259 | - | 768 | WP_023232366.1 | TagF domain-containing protein | - |
| PQP82_RS17715 () | 3633259..3637128 | - | 3870 | WP_023232365.1 | HTH-type transcriptional activator HxlR | VF |
| PQP82_RS17720 () | 3637365..3637859 | - | 495 | WP_023216589.1 | T6SS effector amidase Tae4 family protein | - |
| PQP82_RS17725 () | 3637856..3638641 | - | 786 | WP_023232364.1 | Rap1a/Tai family immunity protein | - |
| PQP82_RS17730 () | 3638646..3639950 | - | 1305 | WP_023232363.1 | hypothetical protein | VF |
| PQP82_RS17735 () | 3639947..3641290 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQP82_RS17740 () | 3641294..3641830 | - | 537 | WP_023206382.1 | hypothetical protein | VF |
| PQP82_RS17745 () | 3641897..3642382 | - | 486 | WP_000119443.1 | Isocitrate dehydrogenase [NADP] | VF |
| PQP82_RS17750 () | 3642525..3642908 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQP82_RS17755 () | 3642893..3643378 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQP82_RS17760 () | 3643421..3643615 | - | 195 | Protein_3476 | type VI secretion system lipoprotein TssJ | - |
| PQP82_RS17765 () | 3643682..3644167 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| PQP82_RS17770 () | 3644421..3644753 | - | 333 | WP_014344502.1 | hypothetical protein | - |
| PQP82_RS17775 () | 3644877..3644987 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PQP82_RS17780 () | 3645050..3646558 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQP82_RS17785 () | 3646582..3647124 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQP82_RS17790 () | 3647224..3649863 | - | 2640 | WP_023232361.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|