MGE detailed information
MGE type: Genomic_island MGE length: 32891 bp
Accession: NZ_CP117317 Location: 3592982..3625872 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM002 Replicon: chromosome
Accession: NZ_CP117317 Location: 3592982..3625872 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ14_RS17460 () | 3588270..3589037 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ14_RS17465 () | 3589408..3589815 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ14_RS17470 () | 3590161..3590880 | + | 720 | WP_274881150.1 | adhesin/invasin protein PagN | - |
| PQQ14_RS17475 () | 3590884..3591098 | - | 215 | Protein_3419 | hypothetical protein | - |
| PQQ14_RS17480 () | 3591218..3592165 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQQ14_RS17485 () | 3592659..3592899 | - | 241 | Protein_3421 | PerC family transcriptional regulator | - |
| PQQ14_RS17490 () | 3592982..3593803 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQQ14_RS17495 () | 3594211..3594681 | - | 471 | WP_023231370.1 | AfaD family invasin | - |
| PQQ14_RS17500 () | 3594703..3597213 | - | 2511 | WP_023231369.1 | F1 capsule-anchoring protein | VF |
| PQQ14_RS17505 () | 3597237..3597977 | - | 741 | WP_000691916.1 | Chaperone protein caf1M | VF |
| PQQ14_RS17510 () | 3598052..3598549 | - | 498 | WP_048348967.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ14_RS17515 () | 3599298..3600002 | - | 705 | Protein_3427 | integrase core domain-containing protein | - |
| PQQ14_RS17520 () | 3600055..3600369 | + | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| PQQ14_RS17525 () | 3600436..3600714 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| PQQ14_RS17530 () | 3601032..3601499 | - | 468 | WP_023232370.1 | hypothetical protein | - |
| PQQ14_RS17535 () | 3602372..3602605 | - | 234 | WP_124741005.1 | hypothetical protein | - |
| - | 3602783..3603195 | - | 413 | - | - | Antitoxin Detail |
| PQQ14_RS17540 () | 3602930..3603205 | + | 276 | WP_023232369.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ14_RS17545 () | 3603262..3603594 | - | 333 | WP_001750702.1 | barstar family protein | - |
| PQQ14_RS17550 () | 3603594..3608288 | - | 4695 | WP_223124460.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ14_RS17555 () | 3608304..3608762 | - | 459 | WP_000186514.1 | DcrB-related protein | - |
| PQQ14_RS17560 () | 3608822..3611056 | - | 2235 | WP_023232367.1 | hypothetical protein | VF |
| PQQ14_RS17565 () | 3611452..3611973 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQQ14_RS17570 () | 3611997..3612413 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQQ14_RS17575 () | 3612410..3612505 | - | 96 | Protein_3439 | cytoplasmic protein | - |
| PQQ14_RS17580 () | 3612541..3613002 | - | 462 | WP_001529547.1 | hypothetical protein | - |
| PQQ14_RS17585 () | 3612987..3613457 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQQ14_RS17590 () | 3613500..3614267 | - | 768 | WP_023232366.1 | TagF domain-containing protein | - |
| PQQ14_RS17595 () | 3614267..3618136 | - | 3870 | WP_274881152.1 | hypothetical protein | VF |
| PQQ14_RS17600 () | 3618373..3618867 | - | 495 | WP_023216589.1 | T6SS effector amidase Tae4 family protein | - |
| PQQ14_RS17605 () | 3618864..3619649 | - | 786 | WP_023232364.1 | Rap1a/Tai family immunity protein | - |
| PQQ14_RS17610 () | 3619654..3620958 | - | 1305 | WP_023232363.1 | Peptidoglycan-associated lipoprotein | VF |
| PQQ14_RS17615 () | 3620955..3622298 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQQ14_RS17620 () | 3622302..3622838 | - | 537 | WP_023206382.1 | hypothetical protein | VF |
| PQQ14_RS17625 () | 3622905..3623390 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PQQ14_RS17630 () | 3623533..3623916 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQQ14_RS17635 () | 3623901..3624386 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQQ14_RS17640 () | 3624429..3624623 | - | 195 | Protein_3452 | type VI secretion system lipoprotein TssJ | - |
| PQQ14_RS17645 () | 3624690..3625175 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PQQ14_RS17650 () | 3625429..3625761 | - | 333 | WP_014344502.1 | hypothetical protein | - |
| PQQ14_RS17655 () | 3625885..3625995 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PQQ14_RS17660 () | 3626058..3627566 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQQ14_RS17665 () | 3627590..3628132 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQQ14_RS17670 () | 3628232..3630871 | - | 2640 | WP_023232361.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|