MGE detailed information
MGE type: Genomic_island MGE length: 36465 bp
Accession: NZ_CP117312 Location: 1890061..1926525 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM003 Replicon: chromosome
Accession: NZ_CP117312 Location: 1890061..1926525 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP99_RS08975 () | 1885062..1887701 | + | 2640 | WP_023232361.1 | type VI secretion system ATPase TssH | - |
| PQP99_RS08980 () | 1887801..1888343 | + | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQP99_RS08985 () | 1888367..1889875 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQP99_RS08990 () | 1889938..1890048 | + | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PQP99_RS08995 () | 1890172..1890504 | + | 333 | WP_014344502.1 | hypothetical protein | - |
| PQP99_RS09000 () | 1890758..1891243 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PQP99_RS09005 () | 1891310..1891504 | + | 195 | Protein_1761 | type VI secretion system lipoprotein TssJ | - |
| PQP99_RS09010 () | 1891547..1892032 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQP99_RS09015 () | 1892017..1892400 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQP99_RS09020 () | 1892543..1893028 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PQP99_RS09025 () | 1893095..1893631 | + | 537 | WP_023206382.1 | hypothetical protein | VF |
| PQP99_RS09030 () | 1893635..1894978 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQP99_RS09035 () | 1894975..1896279 | + | 1305 | WP_023232363.1 | Peptidoglycan-associated lipoprotein | VF |
| PQP99_RS09040 () | 1896284..1897069 | + | 786 | WP_023232364.1 | Rap1a/Tai family immunity protein | - |
| PQP99_RS09045 () | 1897066..1897560 | + | 495 | WP_023216589.1 | T6SS effector amidase Tae4 family protein | - |
| PQP99_RS09050 () | 1897797..1901666 | + | 3870 | WP_274880123.1 | hypothetical protein | VF |
| PQP99_RS09055 () | 1901666..1902433 | + | 768 | WP_023232366.1 | TagF domain-containing protein | - |
| PQP99_RS09060 () | 1902476..1902946 | + | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQP99_RS09065 () | 1902931..1903392 | + | 462 | WP_001529547.1 | hypothetical protein | - |
| PQP99_RS09070 () | 1903428..1903523 | + | 96 | Protein_1774 | cytoplasmic protein | - |
| PQP99_RS09075 () | 1903520..1903936 | + | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQP99_RS09080 () | 1903960..1904481 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQP99_RS09085 () | 1904877..1907111 | + | 2235 | WP_023232367.1 | hypothetical protein | VF |
| PQP99_RS09090 () | 1907171..1907629 | + | 459 | WP_000186514.1 | DcrB-related protein | - |
| PQP99_RS09095 () | 1907645..1912339 | + | 4695 | WP_223124460.1 | RHS repeat-associated core domain-containing protein | - |
| PQP99_RS09100 () | 1912339..1912671 | + | 333 | WP_001750702.1 | barstar family protein | - |
| PQP99_RS09105 () | 1912728..1913003 | - | 276 | WP_023232369.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1912738..1913150 | + | 413 | - | - | Antitoxin Detail |
| PQP99_RS09110 () | 1913328..1913561 | + | 234 | WP_124741005.1 | hypothetical protein | - |
| PQP99_RS09115 () | 1914434..1914901 | + | 468 | WP_023232370.1 | hypothetical protein | - |
| PQP99_RS09120 () | 1915219..1915497 | + | 279 | WP_012543321.1 | hypothetical protein | - |
| PQP99_RS09125 () | 1915564..1915878 | - | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| PQP99_RS09130 () | 1915931..1916635 | + | 705 | Protein_1786 | integrase core domain-containing protein | - |
| PQP99_RS09135 () | 1917384..1917881 | + | 498 | WP_048348967.1 | Saf-pilin pilus formation protein SafA | - |
| PQP99_RS09140 () | 1917956..1918696 | + | 741 | WP_000691916.1 | Chaperone protein caf1M | VF |
| PQP99_RS09145 () | 1918720..1921230 | + | 2511 | WP_023231369.1 | F1 capsule-anchoring protein | VF |
| PQP99_RS09150 () | 1921252..1921722 | + | 471 | WP_023231370.1 | AfaD family invasin | - |
| PQP99_RS09155 () | 1922130..1922951 | + | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP99_RS09160 () | 1923034..1923274 | + | 241 | Protein_1792 | PerC family transcriptional regulator | - |
| PQP99_RS09165 () | 1923768..1924715 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP99_RS09170 () | 1924835..1925049 | + | 215 | Protein_1794 | hypothetical protein | - |
| PQP99_RS09175 () | 1925053..1925772 | - | 720 | WP_274880132.1 | Outer membrane protein PagN | VF |
| PQP99_RS09180 () | 1926118..1926525 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP99_RS09185 () | 1926896..1927663 | - | 768 | WP_274880133.1 | amidohydrolase | - |
| PQP99_RS09190 () | 1927772..1930216 | - | 2445 | WP_023209690.1 | acyl-CoA dehydrogenase FadE | - |
| PQP99_RS09195 () | 1930456..1931034 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|