MGE detailed information
MGE type: Genomic_island MGE length: 8755 bp
Accession: NZ_CP117307 Location: 979827..988581 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM004 Replicon: chromosome
Accession: NZ_CP117307 Location: 979827..988581 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ01_RS04645 (975252) | 975252..977819 | - | 2568 | WP_001005814.1 | DNA mismatch repair protein MutS | - |
| PQQ01_RS04650 (977978) | 977978..978504 | + | 527 | Protein_910 | cytoplasmic protein | - |
| PQQ01_RS04655 (978747) | 978747..979403 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| PQQ01_RS04660 (979744) | 979744..979967 | + | 224 | Protein_912 | IS5 family transposase ISEcl3 | Transposase |
| PQQ01_RS04665 (980040) | 980040..980567 | - | 528 | WP_023231965.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ01_RS04670 (980564) | 980564..980854 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ01_RS04675 (981124) | 981124..981313 | - | 190 | Protein_915 | IS3 family transposase | - |
| PQQ01_RS04680 (981718) | 981718..982161 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| PQQ01_RS04685 (982618) | 982618..983268 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| PQQ01_RS04690 (983265) | 983265..984953 | + | 1689 | WP_000848114.1 | Type 3 secretion system secretin | VF |
| PQQ01_RS04695 (984950) | 984950..986068 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| PQQ01_RS04700 (986093) | 986093..988150 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PQQ01_RS04705 (988174) | 988174..988581 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQQ01_RS04710 (988578) | 988578..989873 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQQ01_RS04715 (989851) | 989851..990294 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PQQ01_RS04720 (990294) | 990294..991304 | + | 1011 | WP_023231967.1 | SPI-1 type III secretion system protein SpaN | - |
| PQQ01_RS04725 (991304) | 991304..992215 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| PQQ01_RS04730 (992205) | 992205..992879 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQQ01_RS04735 (992905) | 992905..993165 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|