MGE detailed information
MGE type: Genomic_island MGE length: 17114 bp
Accession: NZ_CP117307 Location: 2310728..2327841 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM004 Replicon: chromosome
Accession: NZ_CP117307 Location: 2310728..2327841 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ01_RS11175 (2307263) | 2307263..2308504 | - | 1242 | WP_001618070.1 | MFS transporter | - |
| PQQ01_RS11180 (2308494) | 2308494..2310002 | - | 1509 | WP_048348841.1 | FAD-dependent oxidoreductase | - |
| PQQ01_RS11185 (2310047) | 2310047..2310535 | + | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQQ01_RS11190 (2310728) | 2310728..2311807 | + | 1080 | WP_023231841.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQQ01_RS11195 (2311859) | 2311859..2312248 | - | 390 | WP_023206403.1 | RidA family protein | - |
| PQQ01_RS11200 (2312419) | 2312419..2312703 | - | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ01_RS11205 (2312693) | 2312693..2312941 | - | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ01_RS11210 (2313616) | 2313616..2314038 | + | 423 | WP_048348840.1 | PTS sugar transporter subunit IIA | - |
| PQQ01_RS11215 (2314098) | 2314098..2314379 | + | 282 | WP_023218025.1 | PTS sugar transporter subunit IIB | - |
| PQQ01_RS11220 (2314391) | 2314391..2315782 | + | 1392 | WP_274891007.1 | PTS galactitol transporter subunit IIC | - |
| PQQ01_RS11225 (2315860) | 2315860..2317371 | + | 1512 | WP_023231843.1 | FGGY family carbohydrate kinase | - |
| PQQ01_RS11230 (2317371) | 2317371..2318405 | + | 1035 | WP_023218028.1 | Zn-dependent alcohol dehydrogenase | - |
| PQQ01_RS11235 (2318592) | 2318592..2319335 | + | 744 | WP_023218029.1 | GntR family transcriptional regulator | - |
| PQQ01_RS11240 (2319341) | 2319341..2320180 | + | 840 | WP_023218030.1 | class II aldolase | - |
| PQQ01_RS11245 (2320222) | 2320222..2320494 | + | 273 | WP_023218031.1 | HPr family phosphocarrier protein | - |
| PQQ01_RS11250 (2320565) | 2320565..2321347 | + | 783 | WP_023218032.1 | 5'/3'-nucleotidase SurE | - |
| PQQ01_RS11255 (2321444) | 2321444..2322499 | + | 1056 | WP_274890993.1 | galactitol-1-phosphate 5-dehydrogenase | - |
| PQQ01_RS11260 (2322662) | 2322662..2322847 | - | 186 | Protein_2203 | ISNCY family transposase | - |
| PQQ01_RS11265 (2322940) | 2322940..2323197 | + | 258 | WP_023231782.1 | DUF1493 family protein | - |
| PQQ01_RS11270 (2323475) | 2323475..2323660 | - | 186 | WP_023231783.1 | DUF29 family protein | - |
| PQQ01_RS11275 (2324061) | 2324061..2324969 | + | 909 | WP_001176641.1 | HTH-type transcriptional regulator DmlR | VF |
| PQQ01_RS11280 (2325143) | 2325143..2326123 | + | 981 | WP_023138151.1 | nitronate monooxygenase | - |
| PQQ01_RS11285 (2326378) | 2326378..2327844 | - | 1467 | WP_000987827.1 | hypothetical protein | - |
| PQQ01_RS11290 (2328102) | 2328102..2329109 | + | 1008 | WP_274890994.1 | LacI family DNA-binding transcriptional regulator | - |
| PQQ01_RS11295 (2329253) | 2329253..2330704 | + | 1452 | WP_001276631.1 | Na+/H+ antiporter NhaC | - |
| PQQ01_RS11300 (2330717) | 2330717..2331919 | + | 1203 | WP_048348838.1 | MalY/PatB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|