MGE detailed information
MGE type: Genomic_island MGE length: 35712 bp
Accession: NZ_CP117301 Location: 3588951..3624662 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM006 Replicon: chromosome
Accession: NZ_CP117301 Location: 3588951..3624662 Organism: Salmonella enterica subsp. enterica serovar Derby strain RM006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP83_RS17435 () | 3584507..3586951 | + | 2445 | WP_023209690.1 | acyl-CoA dehydrogenase FadE | - |
| PQP83_RS17440 () | 3587060..3587827 | + | 768 | WP_274896353.1 | amidohydrolase | - |
| PQP83_RS17445 () | 3588198..3588605 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP83_RS17450 () | 3588951..3589670 | + | 720 | WP_274896354.1 | hypothetical protein | VF |
| PQP83_RS17455 () | 3589674..3589888 | - | 215 | Protein_3415 | hypothetical protein | - |
| PQP83_RS17460 () | 3590008..3590955 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP83_RS17465 () | 3591449..3591689 | - | 241 | Protein_3417 | PerC family transcriptional regulator | - |
| PQP83_RS17470 () | 3591772..3592593 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP83_RS17475 () | 3593001..3593471 | - | 471 | WP_023231370.1 | AfaD family invasin | - |
| PQP83_RS17480 () | 3593493..3596003 | - | 2511 | WP_023231369.1 | hypothetical protein | VF |
| PQP83_RS17485 () | 3596027..3596767 | - | 741 | WP_000691916.1 | hypothetical protein | VF |
| PQP83_RS17490 () | 3596842..3597339 | - | 498 | WP_048348967.1 | Saf-pilin pilus formation protein SafA | - |
| PQP83_RS17495 () | 3598088..3598792 | - | 705 | Protein_3423 | integrase core domain-containing protein | - |
| PQP83_RS17500 () | 3598845..3599159 | + | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| PQP83_RS17505 () | 3599226..3599504 | - | 279 | WP_012543321.1 | hypothetical protein | - |
| PQP83_RS17510 () | 3599822..3600289 | - | 468 | WP_023232370.1 | hypothetical protein | - |
| PQP83_RS17515 () | 3601162..3601395 | - | 234 | WP_124741005.1 | hypothetical protein | - |
| - | 3601573..3601985 | - | 413 | - | - | Antitoxin Detail |
| PQP83_RS17520 () | 3601720..3601995 | + | 276 | WP_023232369.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP83_RS17525 () | 3602052..3602384 | - | 333 | WP_001750702.1 | barstar family protein | - |
| PQP83_RS17530 () | 3602384..3607078 | - | 4695 | WP_223124460.1 | RHS repeat-associated core domain-containing protein | - |
| PQP83_RS17535 () | 3607094..3607552 | - | 459 | WP_000186514.1 | DcrB-related protein | - |
| PQP83_RS17540 () | 3607612..3609846 | - | 2235 | WP_023232367.1 | hypothetical protein | VF |
| PQP83_RS17545 () | 3610242..3610763 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| PQP83_RS17550 () | 3610787..3611203 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PQP83_RS17555 () | 3611200..3611295 | - | 96 | Protein_3435 | cytoplasmic protein | - |
| PQP83_RS17560 () | 3611331..3611792 | - | 462 | WP_001529547.1 | hypothetical protein | - |
| PQP83_RS17565 () | 3611777..3612247 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PQP83_RS17570 () | 3612290..3613057 | - | 768 | WP_023232366.1 | TagF domain-containing protein | - |
| PQP83_RS17575 () | 3613057..3616926 | - | 3870 | WP_023232365.1 | hypothetical protein | VF |
| PQP83_RS17580 () | 3617163..3617657 | - | 495 | WP_023216589.1 | T6SS effector amidase Tae4 family protein | - |
| PQP83_RS17585 () | 3617654..3618439 | - | 786 | WP_023232364.1 | Rap1a/Tai family immunity protein | - |
| PQP83_RS17590 () | 3618444..3619748 | - | 1305 | WP_023232363.1 | hypothetical protein | VF |
| PQP83_RS17595 () | 3619745..3621088 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| PQP83_RS17600 () | 3621092..3621628 | - | 537 | WP_023206382.1 | hypothetical protein | VF |
| PQP83_RS17605 () | 3621695..3622180 | - | 486 | WP_000119443.1 | hypothetical protein | VF |
| PQP83_RS17610 () | 3622323..3622706 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PQP83_RS17615 () | 3622691..3623176 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PQP83_RS17620 () | 3623219..3623413 | - | 195 | Protein_3448 | type VI secretion system lipoprotein TssJ | - |
| PQP83_RS17625 () | 3623480..3623965 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| PQP83_RS17630 () | 3624219..3624551 | - | 333 | WP_014344502.1 | hypothetical protein | - |
| PQP83_RS17635 () | 3624675..3624785 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PQP83_RS17640 () | 3624848..3626356 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PQP83_RS17645 () | 3626380..3626922 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PQP83_RS17650 () | 3627022..3629661 | - | 2640 | WP_023232361.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|