MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16435 bp
Accession: NZ_CP117299 Location: 877638..894072 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM-F22S Replicon: chromosome
Accession: NZ_CP117299 Location: 877638..894072 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM-F22S Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PH350_RS04190 (873221) | 873221..873985 | - | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
| PH350_RS04195 (874010) | 874010..875041 | - | 1032 | WP_017441182.1 | L-idonate 5-dehydrogenase | - |
| PH350_RS04200 (875258) | 875258..875788 | + | 531 | WP_017441181.1 | gluconokinase | - |
| PH350_RS04205 (875816) | 875816..876835 | - | 1020 | WP_000152563.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PH350_RS04215 (877593) | 877593..878570 | + | 978 | WP_223195356.1 | IS630 family transposase ISEc33 | Transposase |
| PH350_RS04220 (878590) | 878590..878898 | + | 309 | Protein_809 | DUF4942 domain-containing protein | - |
| PH350_RS04225 (878999) | 878999..879223 | + | 225 | WP_031233173.1 | ribbon-helix-helix protein, CopG family | - |
| PH350_RS04230 (879332) | 879332..879571 | + | 240 | WP_000016244.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PH350_RS04235 (879574) | 879574..879882 | + | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PH350_RS04240 (880249) | 880249..881175 | - | 927 | WP_017441178.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PH350_RS04245 (881165) | 881165..882784 | - | 1620 | WP_017441177.1 | MobH family relaxase | - |
| PH350_RS04250 (883075) | 883075..883530 | - | 456 | WP_031615695.1 | NUDIX domain-containing protein | - |
| PH350_RS04255 (883636) | 883636..884547 | - | 912 | WP_017441175.1 | zincin-like metallopeptidase domain-containing protein | - |
| PH350_RS04260 (884633) | 884633..884926 | - | 294 | WP_023242879.1 | hypothetical protein | - |
| PH350_RS04265 (885293) | 885293..886165 | - | 873 | WP_017441173.1 | HNH endonuclease | - |
| PH350_RS04270 (886411) | 886411..888234 | - | 1824 | WP_023242880.1 | response regulator receiver domain | - |
| PH350_RS04275 (888227) | 888227..891196 | - | 2970 | WP_017441735.1 | ATP-binding protein | - |
| PH350_RS04280 (891290) | 891290..892486 | - | 1197 | WP_017441736.1 | DNA cytosine methyltransferase | - |
| PH350_RS04285 (892961) | 892961..894072 | + | 1112 | WP_093976780.1 | IS3 family transposase IS1351 | Transposase |
| PH350_RS04290 (894585) | 894585..895301 | - | 717 | WP_000532939.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PH350_RS04295 (895861) | 895861..897492 | - | 1632 | WP_017441740.1 | class I SAM-dependent methyltransferase | - |
| PH350_RS04300 (897497) | 897497..897753 | - | 257 | Protein_825 | YjhX family toxin | - |
| PH350_RS04305 (898242) | 898242..898850 | + | 609 | WP_000864866.1 | DUF1062 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|