MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP117292        Location: 4300725..4433641         Organism: Salmonella enterica subsp. enterica serovar Typhi strain S4       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PRW96_RS21115 (PRW96_21115) 4296524..4297825 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PRW96_RS21120 (PRW96_21120) 4297946..4298293 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PRW96_RS21125 (PRW96_21125) 4298269..4299972 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PRW96_RS21130 (PRW96_21130) 4300009..4300584 + 576 WP_001188506.1 transcriptional regulator -
PRW96_RS21140 (PRW96_21140) 4300935..4302194 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PRW96_RS21145 (PRW96_21145) 4302505..4303788 + 1284 WP_000975154.1 SH3 domain-containing protein -
PRW96_RS21150 (PRW96_21150) 4303873..4304142 + 270 Protein_4135 integrase -
PRW96_RS21155 (PRW96_21155) 4304769..4305551 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PRW96_RS21160 (PRW96_21160) 4305821..4306015 + 195 WP_162009227.1 hypothetical protein -
PRW96_RS21165 (PRW96_21165) 4306408..4306629 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PRW96_RS21170 (PRW96_21170) 4306626..4307087 - 462 WP_000246267.1 hypothetical protein -
PRW96_RS21175 (PRW96_21175) 4307634..4309307 + 1674 WP_010989301.1 hypothetical protein -
PRW96_RS21180 (PRW96_21180) 4309388..4311673 + 2286 WP_010989300.1 hypothetical protein -
PRW96_RS21185 (PRW96_21185) 4311977..4312228 + 252 WP_024131240.1 hypothetical protein -
PRW96_RS21190 (PRW96_21190) 4312310..4312762 + 453 WP_000434168.1 hypothetical protein -
PRW96_RS21195 (PRW96_21195) 4312942..4313430 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PRW96_RS21200 (PRW96_21200) 4313427..4313720 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PRW96_RS21205 (PRW96_21205) 4314147..4315160 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW96_RS21210 (PRW96_21210) 4315324..4316913 - 1590 WP_000488995.1 TraI domain-containing protein -
PRW96_RS21215 (PRW96_21215) 4316897..4318408 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PRW96_RS21220 (PRW96_21220) 4319262..4319801 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PRW96_RS21225 (PRW96_21225) 4320046..4321323 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PRW96_RS21230 (PRW96_21230) 4321326..4322372 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PRW96_RS21235 (PRW96_21235) 4322396..4324891 + 2496 WP_010989299.1 hypothetical protein VF
PRW96_RS21240 (PRW96_21240) 4324891..4326627 + 1737 WP_274360154.1 hypothetical protein VF
PRW96_RS21245 (PRW96_21245) 4326672..4327739 + 1068 WP_000720235.1 hypothetical protein VF
PRW96_RS21250 (PRW96_21250) 4327749..4328543 + 795 WP_001023498.1 hypothetical protein VF
PRW96_RS21255 (PRW96_21255) 4328569..4329264 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PRW96_RS21260 (PRW96_21260) 4329287..4330591 + 1305 WP_000431675.1 hypothetical protein VF
PRW96_RS21265 (PRW96_21265) 4330611..4332581 + 1971 WP_000052242.1 hypothetical protein VF
PRW96_RS21270 (PRW96_21270) 4332883..4333629 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PRW96_RS21275 (PRW96_21275) 4333629..4334519 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PRW96_RS21280 (PRW96_21280) 4334530..4334787 - 258 WP_001681810.1 YjhX family toxin -
PRW96_RS21285 (PRW96_21285) 4335089..4335199 - 111 Protein_4162 autoinducer 2 ABC transporter substrate-binding protein -
PRW96_RS21290 (PRW96_21290) 4335434..4335778 + 345 Protein_4163 translesion error-prone DNA polymerase V autoproteolytic subunit -
PRW96_RS21295 (PRW96_21295) 4335894..4336919 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW96_RS21300 (PRW96_21300) 4336923..4337555 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PRW96_RS21305 (PRW96_21305) 4337672..4337914 + 243 WP_000102106.1 Rha family transcriptional regulator -
PRW96_RS21310 (PRW96_21310) 4337947..4338456 + 510 WP_000460852.1 phage regulatory CII family protein -
PRW96_RS21315 (PRW96_21315) 4338464..4338664 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PRW96_RS21320 (PRW96_21320) 4338628..4338969 + 342 WP_000963478.1 DUF5347 domain-containing protein -
PRW96_RS21325 (PRW96_21325) 4339037..4339270 + 234 WP_001244240.1 DUF2732 family protein -
PRW96_RS21330 (PRW96_21330) 4339270..4339497 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PRW96_RS21335 (PRW96_21335) 4339494..4340078 + 585 WP_001090717.1 exonuclease domain-containing protein -
PRW96_RS21340 (PRW96_21340) 4340075..4340935 + 861 WP_000104130.1 DNA adenine methylase -
PRW96_RS21345 (PRW96_21345) 4340926..4343334 + 2409 WP_000301193.1 replication endonuclease -
PRW96_RS21350 (PRW96_21350) 4343502..4343690 + 189 WP_001154438.1 hypothetical protein -
PRW96_RS21355 (PRW96_21355) 4343702..4343935 + 234 WP_001217561.1 DinI family protein -
PRW96_RS21360 (PRW96_21360) 4344031..4344249 + 219 WP_000835188.1 hypothetical protein -
PRW96_RS21365 (PRW96_21365) 4344259..4345323 + 1065 WP_000829584.1 hypothetical protein -
PRW96_RS21370 (PRW96_21370) 4345320..4346384 + 1065 WP_055385150.1 hypothetical protein -
PRW96_RS21375 (PRW96_21375) 4346404..4347099 + 696 WP_000080839.1 hypothetical protein -
PRW96_RS21380 (PRW96_21380) 4347148..4348191 - 1044 WP_001681813.1 phage portal protein -
PRW96_RS21385 (PRW96_21385) 4348191..4349957 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PRW96_RS21390 (PRW96_21390) 4350100..4350933 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PRW96_RS21395 (PRW96_21395) 4350950..4352014 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PRW96_RS21400 (PRW96_21400) 4352018..4352668 + 651 WP_000059175.1 terminase endonuclease subunit -
PRW96_RS21405 (PRW96_21405) 4352762..4353226 + 465 WP_000673540.1 head completion/stabilization protein -
PRW96_RS21410 (PRW96_21410) 4353226..4353429 + 204 WP_000868184.1 tail protein X -
PRW96_RS21415 (PRW96_21415) 4353433..4353648 + 216 WP_000171566.1 HP1 family phage holin -
PRW96_RS21420 (PRW96_21420) 4353629..4354138 + 510 WP_001097942.1 lysozyme -
PRW96_RS21425 (PRW96_21425) 4354143..4354520 + 378 WP_000731034.1 DNZ54_00345 family protein -
PRW96_RS21430 (PRW96_21430) 4354517..4354945 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PRW96_RS21435 (PRW96_21435) 4354830..4355078 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PRW96_RS21440 (PRW96_21440) 4355041..4355472 + 432 WP_001039961.1 phage tail protein -
PRW96_RS21445 (PRW96_21445) 4355465..4355911 + 447 WP_000343944.1 phage virion morphogenesis protein -
PRW96_RS21450 (PRW96_21450) 4355980..4356558 + 579 WP_000993749.1 phage baseplate assembly protein V -
PRW96_RS21455 (PRW96_21455) 4356555..4356914 + 360 WP_000177408.1 GPW/gp25 family protein -
PRW96_RS21460 (PRW96_21460) 4356901..4357809 + 909 WP_000268327.1 baseplate assembly protein -
PRW96_RS21465 (PRW96_21465) 4357802..4358407 + 606 WP_001086816.1 phage tail protein I -
PRW96_RS21470 (PRW96_21470) 4358404..4360023 + 1620 WP_000104806.1 phage tail protein -
PRW96_RS21475 (PRW96_21475) 4360030..4360437 + 408 WP_000006337.1 tail fiber assembly protein -
PRW96_RS21480 (PRW96_21480) 4360635..4361357 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PRW96_RS21485 (PRW96_21485) 4361568..4361789 + 222 Protein_4202 helix-turn-helix domain-containing protein -
PRW96_RS21490 (PRW96_21490) 4361892..4363064 + 1173 WP_000046101.1 phage tail sheath protein -
PRW96_RS21495 (PRW96_21495) 4363074..4363589 + 516 WP_001207653.1 phage major tail tube protein -
PRW96_RS21500 (PRW96_21500) 4363644..4363946 + 303 WP_001280965.1 phage tail assembly protein -
PRW96_RS21505 (PRW96_21505) 4363961..4364080 + 120 WP_000763315.1 GpE family phage tail protein -
PRW96_RS21510 (PRW96_21510) 4364073..4366853 + 2781 WP_001282813.1 phage tail tape measure protein -
PRW96_RS21515 (PRW96_21515) 4366853..4367338 + 486 WP_000980405.1 phage tail protein -
PRW96_RS21520 (PRW96_21520) 4367335..4368435 + 1101 WP_001011750.1 phage late control D family protein -
PRW96_RS21525 (PRW96_21525) 4368503..4368721 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PRW96_RS21530 (PRW96_21530) 4368808..4369185 - 378 WP_001039750.1 hypothetical protein -
PRW96_RS21535 (PRW96_21535) 4369319..4369405 + 87 Protein_4212 peptidase -
PRW96_RS21540 (PRW96_21540) 4369405..4370679 + 1275 WP_000457555.1 Y-family DNA polymerase -
PRW96_RS21545 (PRW96_21545) 4370811..4371080 + 270 WP_001222413.1 hypothetical protein -
PRW96_RS21550 (PRW96_21550) 4371180..4371506 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PRW96_RS21555 (PRW96_21555) 4371581..4372480 - 900 WP_000022217.1 hypothetical protein -
PRW96_RS21560 (PRW96_21560) 4372554..4373462 - 909 WP_000881183.1 hypothetical protein -
PRW96_RS21565 (PRW96_21565) 4373534..4375483 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PRW96_RS21570 (PRW96_21570) 4375572..4376030 - 459 WP_000115421.1 hypothetical protein -
PRW96_RS21575 (PRW96_21575) 4376108..4376404 - 297 WP_000968700.1 hypothetical protein -
PRW96_RS21580 (PRW96_21580) 4376401..4376853 - 453 WP_000979718.1 hypothetical protein -
PRW96_RS21585 (PRW96_21585) 4376871..4377080 - 210 WP_000018145.1 hypothetical protein -
PRW96_RS21590 (PRW96_21590) 4377451..4377831 - 381 WP_001103837.1 hypothetical protein -
PRW96_RS21595 (PRW96_21595) 4377927..4378229 - 303 WP_001020123.1 hypothetical protein -
PRW96_RS21600 (PRW96_21600) 4378953..4379873 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PRW96_RS21605 (PRW96_21605) 4381139..4381681 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PRW96_RS21610 (PRW96_21610) 4381892..4382533 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PRW96_RS21615 (PRW96_21615) 4382518..4383765 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PRW96_RS21620 (PRW96_21620) 4384053..4384412 + 360 WP_010989293.1 hypothetical protein -
PRW96_RS21625 (PRW96_21625) 4384636..4385025 + 390 WP_000993574.1 hypothetical protein -
PRW96_RS21630 (PRW96_21630) 4385061..4386566 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PRW96_RS21635 (PRW96_21635) 4386899..4388296 - 1398 WP_014341560.1 integrating conjugative element protein -
PRW96_RS21640 (PRW96_21640) 4388344..4389312 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PRW96_RS21645 (PRW96_21645) 4389309..4389701 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PRW96_RS21650 (PRW96_21650) 4389856..4390242 - 387 WP_000054770.1 hypothetical protein -
PRW96_RS21655 (PRW96_21655) 4390397..4393113 - 2717 Protein_4236 conjugative transfer ATPase -
PRW96_RS21660 (PRW96_21660) 4393233..4393682 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PRW96_RS21665 (PRW96_21665) 4393669..4395147 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PRW96_RS21670 (PRW96_21670) 4395137..4396036 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PRW96_RS21675 (PRW96_21675) 4396036..4396689 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PRW96_RS21680 (PRW96_21680) 4396686..4397060 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PRW96_RS21685 (PRW96_21685) 4397070..4397435 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PRW96_RS21690 (PRW96_21690) 4397462..4397695 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PRW96_RS21695 (PRW96_21695) 4397701..4397955 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PRW96_RS21700 (PRW96_21700) 4398192..4398950 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PRW96_RS21705 (PRW96_21705) 4398947..4401037 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PRW96_RS21710 (PRW96_21710) 4401057..4401626 - 570 WP_000626967.1 restriction endonuclease -
PRW96_RS21715 (PRW96_21715) 4401636..4402136 - 501 WP_000253629.1 integrating conjugative element protein -
PRW96_RS21720 (PRW96_21720) 4402172..4402858 - 687 WP_000013624.1 hypothetical protein VF
PRW96_RS21725 (PRW96_21725) 4402837..4403523 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PRW96_RS21730 (PRW96_21730) 4403596..4404510 - 915 WP_000214158.1 hypothetical protein -
PRW96_RS21735 (PRW96_21735) 4404467..4404829 - 363 WP_001149494.1 hypothetical protein -
PRW96_RS21740 (PRW96_21740) 4405017..4405892 - 876 WP_000994659.1 hypothetical protein -
PRW96_RS21745 (PRW96_21745) 4406104..4406571 - 468 WP_000455463.1 hypothetical protein -
PRW96_RS21750 (PRW96_21750) 4406668..4407819 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PRW96_RS21755 (PRW96_21755) 4408170..4409474 - 1305 WP_000744277.1 hypothetical protein VF
PRW96_RS21760 (PRW96_21760) 4409471..4410133 - 663 WP_000218698.1 hypothetical protein VF
PRW96_RS21765 (PRW96_21765) 4410130..4410573 - 444 WP_223228896.1 hypothetical protein VF
PRW96_RS21770 (PRW96_21770) 4410616..4411212 - 597 WP_024131234.1 hypothetical protein VF
PRW96_RS21775 (PRW96_21775) 4411251..4412336 - 1086 WP_000074784.1 hypothetical protein VF
PRW96_RS21780 (PRW96_21780) 4412333..4414048 - 1716 WP_001289222.1 hypothetical protein VF
PRW96_RS21785 (PRW96_21785) 4414058..4414438 - 381 WP_014341558.1 hypothetical protein VF
PRW96_RS21790 (PRW96_21790) 4414626..4415912 - 1287 WP_000763621.1 hypothetical protein VF
PRW96_RS21795 (PRW96_21795) 4415914..4416252 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PRW96_RS21800 (PRW96_21800) 4416218..4417153 - 936 WP_049783585.1 hypothetical protein VF
PRW96_RS21805 (PRW96_21805) 4417624..4418043 - 420 WP_000539682.1 hypothetical protein VF
PRW96_RS21810 (PRW96_21810) 4418046..4419290 - 1245 WP_001095932.1 hypothetical protein VF
PRW96_RS21815 (PRW96_21815) 4419455..4420405 - 951 Protein_4268 ISNCY family transposase ISPlu22 VF
PRW96_RS21820 (PRW96_21820) 4420471..4421007 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PRW96_RS21825 (PRW96_21825) 4421020..4421238 - 219 WP_000958171.1 hypothetical protein -
PRW96_RS21830 (PRW96_21830) 4421319..4421768 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PRW96_RS21835 (PRW96_21835) 4422436..4424430 - 1995 WP_001241572.1 DNA topoisomerase III -
PRW96_RS21840 (PRW96_21840) 4424541..4425317 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PRW96_RS21845 (PRW96_21845) 4425906..4427216 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PRW96_RS21850 (PRW96_21850) 4427246..4427494 - 249 WP_000377625.1 hypothetical protein -
PRW96_RS21855 (PRW96_21855) 4427494..4428051 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PRW96_RS21860 (PRW96_21860) 4428136..4428858 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PRW96_RS21865 (PRW96_21865) 4428845..4429105 - 261 WP_000838568.1 hypothetical protein -
PRW96_RS21870 (PRW96_21870) 4429319..4431118 - 1800 WP_001029724.1 ParB family protein -
PRW96_RS21875 (PRW96_21875) 4431111..4432475 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PRW96_RS21880 (PRW96_21880) 4432472..4433506 - 1035 WP_001195363.1 hypothetical protein VF
PRW96_RS21885 (PRW96_21885) 4433720..4433794 - 75 Protein_4282 helix-turn-helix domain-containing protein -
PRW96_RS21890 (PRW96_21890) 4434174..4434251 + 78 Protein_4283 porin family protein -
PRW96_RS21895 (PRW96_21895) 4434351..4435103 + 753 WP_001785756.1 non-specific acid phosphatase -
PRW96_RS21900 (PRW96_21900) 4435344..4435835 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PRW96_RS21905 (PRW96_21905) 4435832..4436125 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PRW96_RS21910 (PRW96_21910) 4436442..4436664 + 223 Protein_4287 hypothetical protein -
PRW96_RS21915 (PRW96_21915) 4436930..4437805 + 876 WP_000921674.1 AraC family transcriptional regulator -
PRW96_RS21920 (PRW96_21920) 4437802..4438089 + 288 WP_001269916.1 transcriptional regulator RtsB -
PRW96_RS21925 (PRW96_21925) 4438112..4438328 + 217 Protein_4290 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance