MGE detailed information
MGE type: Genomic_island MGE length: 16152 bp
Accession: NZ_CP117292 Location: 1006338..1022489 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S4 Replicon: chromosome
Accession: NZ_CP117292 Location: 1006338..1022489 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRW96_RS04840 (PRW96_04840) | 1001478..1002576 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PRW96_RS04845 (PRW96_04845) | 1002586..1004103 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
| PRW96_RS04850 (PRW96_04850) | 1004179..1004724 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PRW96_RS04855 (PRW96_04855) | 1004989..1005747 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PRW96_RS04865 (PRW96_04865) | 1006035..1007654 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PRW96_RS04870 (PRW96_04870) | 1008590..1009309 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| PRW96_RS04875 (PRW96_04875) | 1009313..1009516 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| PRW96_RS04880 (PRW96_04880) | 1009599..1010054 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| PRW96_RS04885 (PRW96_04885) | 1010156..1011277 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| PRW96_RS04890 (PRW96_04890) | 1011910..1012716 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| PRW96_RS04895 (PRW96_04895) | 1012991..1013242 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PRW96_RS04900 (PRW96_04900) | 1013419..1013646 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PRW96_RS04905 (PRW96_04905) | 1013646..1014044 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PRW96_RS04910 (PRW96_04910) | 1014851..1015387 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| PRW96_RS04915 (PRW96_04915) | 1015434..1016066 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| PRW96_RS04920 (PRW96_04920) | 1016785..1017366 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| PRW96_RS04925 (PRW96_04925) | 1017486..1019975 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| PRW96_RS04930 (PRW96_04930) | 1020016..1020759 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| PRW96_RS04935 (PRW96_04935) | 1020756..1021832 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| PRW96_RS04940 (PRW96_04940) | 1021977..1022489 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| PRW96_RS04945 (PRW96_04945) | 1022476..1023234 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| PRW96_RS04950 (PRW96_04950) | 1023444..1024310 | - | 867 | Protein_960 | nickel/cobalt efflux protein RcnA | - |
| PRW96_RS04955 (PRW96_04955) | 1024432..1024704 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PRW96_RS04960 (PRW96_04960) | 1024735..1025964 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PRW96_RS04965 (PRW96_04965) | 1026106..1026561 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|