MGE detailed information
MGE type: Prophage MGE length: 36995 bp
Accession: NZ_CP117290 Location: 1933993..1970987 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S6 Replicon: chromosome
Accession: NZ_CP117290 Location: 1933993..1970987 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRW98_RS09295 (PRW98_09295) | 1930265..1930906 | + | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PRW98_RS09300 (PRW98_09300) | 1931006..1932184 | - | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PRW98_RS09305 (PRW98_09305) | 1932315..1932605 | + | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| PRW98_RS09310 (PRW98_09310) | 1932673..1933026 | + | 354 | WP_001042123.1 | protein YebF | - |
| PRW98_RS09315 (PRW98_09315) | 1933120..1933779 | + | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| PRW98_RS09320 (PRW98_09320) | 1933993..1936044 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PRW98_RS09325 (PRW98_09325) | 1936081..1936779 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PRW98_RS09330 (PRW98_09330) | 1936803..1937459 | - | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| PRW98_RS09335 (PRW98_09335) | 1937567..1937797 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PRW98_RS09340 (PRW98_09340) | 1937935..1938309 | + | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| PRW98_RS09345 (PRW98_09345) | 1938310..1939185 | + | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| PRW98_RS09350 (PRW98_09350) | 1939202..1939555 | + | 354 | WP_000722366.1 | YebY family protein | - |
| - | 1939657..1939800 | - | 144 | - | - | Antitoxin Detail |
| - | 1939696..1939798 | + | 103 | - | - | Toxin Detail |
| PRW98_RS09355 (PRW98_09355) | 1939919..1940227 | - | 309 | Protein_1825 | hypothetical protein ; Integrase | Integrase |
| PRW98_RS09360 (PRW98_09360) | 1940226..1940587 | - | 362 | Protein_1826 | recombinase RecT | - |
| PRW98_RS09365 (PRW98_09365) | 1940588..1940698 | + | 111 | Protein_1827 | replication protein | - |
| PRW98_RS09370 (PRW98_09370) | 1940711..1941106 | + | 396 | Protein_1828 | DUF977 family protein | - |
| PRW98_RS09375 (PRW98_09375) | 1941392..1942522 | - | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| PRW98_RS09380 (PRW98_09380) | 1942918..1944897 | + | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PRW98_RS09385 (PRW98_09385) | 1945306..1945920 | - | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| PRW98_RS09390 (PRW98_09390) | 1945930..1946088 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PRW98_RS09395 (PRW98_09395) | 1946221..1947135 | - | 915 | WP_001233444.1 | DMT family transporter | - |
| PRW98_RS09400 (PRW98_09400) | 1948434..1948855 | - | 422 | Protein_1834 | tyrosine-type recombinase/integrase | - |
| PRW98_RS09405 (PRW98_09405) | 1948925..1950195 | + | 1271 | Protein_1835 | IS256 family transposase ISEc39 | Transposase |
| PRW98_RS09410 (PRW98_09410) | 1950171..1950311 | - | 141 | WP_031624337.1 | hypothetical protein | - |
| PRW98_RS09415 (PRW98_09415) | 1950480..1950746 | - | 267 | WP_010989185.1 | hypothetical protein | - |
| PRW98_RS09420 (PRW98_09420) | 1951117..1951536 | + | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| PRW98_RS09425 (PRW98_09425) | 1951924..1952400 | - | 477 | WP_000030950.1 | hypothetical protein | - |
| PRW98_RS09430 (PRW98_09430) | 1952729..1953124 | - | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| PRW98_RS09435 (PRW98_09435) | 1953871..1954529 | + | 659 | Protein_1841 | hypothetical protein | VF |
| PRW98_RS09440 (PRW98_09440) | 1954814..1954978 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| PRW98_RS09445 (PRW98_09445) | 1955202..1955852 | + | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| PRW98_RS09450 (PRW98_09450) | 1955871..1956062 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PRW98_RS09455 (PRW98_09455) | 1956173..1956409 | - | 237 | WP_024131167.1 | YebV family protein | - |
| PRW98_RS09460 (PRW98_09460) | 1956527..1957966 | - | 1440 | WP_010989184.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PRW98_RS09465 (PRW98_09465) | 1958044..1960677 | - | 2634 | WP_001521100.1 | hypothetical protein | VF |
| PRW98_RS09470 (PRW98_09470) | 1960646..1961929 | - | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| PRW98_RS09475 (PRW98_09475) | 1962058..1962555 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PRW98_RS09480 (PRW98_09480) | 1962653..1963339 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PRW98_RS09485 (PRW98_09485) | 1963359..1965407 | + | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| PRW98_RS09490 (PRW98_09490) | 1965600..1966481 | + | 882 | WP_000984498.1 | protease HtpX | - |
| PRW98_RS09495 (PRW98_09495) | 1966529..1967901 | - | 1373 | Protein_1853 | MFS transporter | - |
| PRW98_RS09500 (PRW98_09500) | 1968077..1968868 | + | 792 | WP_001262197.1 | DNA-binding transcriptional regulator KdgR | - |
| PRW98_RS09505 (PRW98_09505) | 1969080..1969319 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| PRW98_RS09510 (PRW98_09510) | 1969472..1969615 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PRW98_RS09515 (PRW98_09515) | 1969686..1969973 | + | 288 | WP_001000660.1 | YebO family protein | - |
| PRW98_RS09520 (PRW98_09520) | 1970622..1970765 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PRW98_RS09525 (PRW98_09525) | 1970778..1970987 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PRW98_RS09530 (PRW98_09530) | 1971207..1972952 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PRW98_RS09535 (PRW98_09535) | 1973018..1973827 | + | 810 | WP_000010934.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PRW98_RS09540 (PRW98_09540) | 1973824..1974390 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PRW98_RS09545 (PRW98_09545) | 1974800..1975258 | - | 459 | WP_000156273.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|