MGE detailed information
MGE type: IScluster/Tn MGE length: 3412 bp
Accession: NZ_CP117268 Location: 1155787..1159198 Organism: Rhizobium rhododendri strain rho-6.2 Replicon: plasmid unnamed1
Accession: NZ_CP117268 Location: 1155787..1159198 Organism: Rhizobium rhododendri strain rho-6.2 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PR018_RS23025 (PR018_23030) | 1150790..1151278 | + | 489 | WP_205470436.1 | hypothetical protein | - |
| PR018_RS23030 (PR018_23035) | 1151904..1152803 | + | 900 | WP_142832586.1 | HEPN domain-containing protein | - |
| PR018_RS23035 (PR018_23040) | 1153467..1154051 | - | 585 | WP_219271068.1 | plasmid pRiA4b ORF-3 family protein | - |
| PR018_RS23040 (PR018_23045) | 1154051..1155709 | - | 1659 | WP_142832615.1 | IS66 family transposase | - |
| PR018_RS23045 (PR018_23050) | 1155787..1156134 | - | 348 | WP_046119556.1 | IS66 family transposase ISAzs20 | Transposase |
| PR018_RS23050 (PR018_23055) | 1156131..1156478 | - | 348 | WP_111217014.1 | IS66 family transposase ISNisp6 | Transposase |
| PR018_RS23055 (PR018_23060) | 1157286..1157552 | + | 267 | WP_142832620.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PR018_RS23060 (PR018_23065) | 1157549..1157971 | + | 423 | WP_142832619.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PR018_RS23065 (PR018_23070) | 1158074..1159198 | + | 1125 | WP_143123525.1 | IS5 family transposase ISAzs10 | Transposase |
| PR018_RS23070 (PR018_23075) | 1159352..1159813 | + | 462 | WP_142832600.1 | hypothetical protein | - |
| PR018_RS23075 (PR018_23080) | 1160377..1160798 | - | 422 | Protein_1039 | MucR family transcriptional regulator | - |
| PR018_RS23080 (PR018_23085) | 1161340..1161663 | + | 324 | WP_142832599.1 | hypothetical protein | - |
| PR018_RS23085 (PR018_23090) | 1161809..1161934 | - | 126 | WP_257625516.1 | hypothetical protein | - |
| PR018_RS23090 (PR018_23095) | 1162159..1163058 | + | 900 | WP_279621437.1 | HEPN domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|