MGE detailed information
MGE type: Genomic_island MGE length: 27052 bp
Accession: NZ_CP117235 Location: 2981097..3008148 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP117235 Location: 2981097..3008148 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ28_RS14765 (2976426) | 2976426..2978018 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| PQQ28_RS14770 (2978015) | 2978015..2978221 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| PQQ28_RS14775 (2978205) | 2978205..2980133 | - | 1929 | WP_001309424.1 | phage terminase large subunit family protein | - |
| PQQ28_RS14780 (2980105) | 2980105..2980614 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| PQQ28_RS14785 (2981271) | 2981271..2981450 | + | 180 | WP_000253883.1 | hypothetical protein | - |
| PQQ28_RS14790 (2981573) | 2981573..2981899 | - | 327 | WP_000830178.1 | TonB family protein | - |
| PQQ28_RS14795 (2982210) | 2982210..2982677 | - | 468 | WP_032142285.1 | lysis protein | - |
| PQQ28_RS14800 (2982680) | 2982680..2982811 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| PQQ28_RS14805 (2982826) | 2982826..2983008 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| PQQ28_RS14810 (2983165) | 2983165..2983698 | - | 534 | WP_001092866.1 | lysozyme | - |
| PQQ28_RS14815 (2984290) | 2984290..2984625 | - | 336 | Protein_2834 | YdfR family protein | - |
| PQQ28_RS14820 (2984630) | 2984630..2984845 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| PQQ28_RS14825 (2984922) | 2984922..2985167 | - | 246 | WP_001556910.1 | DUF826 domain-containing protein | - |
| PQQ28_RS14830 (2985205) | 2985205..2985387 | - | 183 | WP_001304601.1 | DUF1378 family protein | - |
| PQQ28_RS14835 (2985524) | 2985524..2987486 | - | 1963 | Protein_2838 | DUF1737 domain-containing protein | - |
| PQQ28_RS14840 (2987747) | 2987747..2988082 | + | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| PQQ28_RS14845 (2988153) | 2988153..2988284 | + | 132 | Protein_2840 | hypothetical protein | - |
| PQQ28_RS14850 (2988467) | 2988467..2988664 | - | 198 | WP_000917765.1 | hypothetical protein | - |
| PQQ28_RS14855 (2988889) | 2988889..2989443 | - | 555 | WP_000640021.1 | DUF1133 family protein | - |
| PQQ28_RS14860 (2989452) | 2989452..2989811 | - | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PQQ28_RS14865 (2989824) | 2989824..2990873 | - | 1050 | WP_001265310.1 | DUF968 domain-containing protein | - |
| PQQ28_RS14870 (2990875) | 2990875..2991153 | - | 279 | WP_032141837.1 | hypothetical protein | - |
| PQQ28_RS14875 (2991320) | 2991320..2991475 | - | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| PQQ28_RS14880 (2992159) | 2992159..2992548 | - | 390 | WP_001556926.1 | hypothetical protein | - |
| PQQ28_RS14885 (2992545) | 2992545..2992721 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| PQQ28_RS14890 (2992714) | 2992714..2992896 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| PQQ28_RS14895 (2992990) | 2992990..2993346 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| PQQ28_RS14900 (2993324) | 2993324..2993467 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| PQQ28_RS14905 (2993478) | 2993478..2993741 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| PQQ28_RS14910 (2993743) | 2993743..2993961 | - | 219 | WP_000209148.1 | DUF4014 family protein | - |
| PQQ28_RS14915 (2993994) | 2993994..2994206 | - | 213 | WP_000072553.1 | hypothetical protein | - |
| PQQ28_RS14920 (2994312) | 2994312..2994734 | - | 423 | Protein_2855 | DUF977 family protein | - |
| PQQ28_RS14925 (2994750) | 2994750..2995520 | - | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| PQQ28_RS14930 (2995542) | 2995542..2996288 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| PQQ28_RS14935 (2996295) | 2996295..2997257 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| PQQ28_RS14940 (2997280) | 2997280..2997705 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| PQQ28_RS14945 (2997702) | 2997702..2998004 | - | 303 | WP_001556930.1 | transcriptional regulator | - |
| PQQ28_RS14950 (2998102) | 2998102..2998473 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| PQQ28_RS14955 (2998494) | 2998494..2998685 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| PQQ28_RS14960 (2998687) | 2998687..2998965 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ28_RS14965 (2999257) | 2999257..2999409 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| PQQ28_RS14970 (2999421) | 2999421..2999759 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| PQQ28_RS14975 (2999748) | 2999748..2999942 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| PQQ28_RS14980 (3000518) | 3000518..3000706 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| PQQ28_RS14985 (3000703) | 3000703..3000891 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| PQQ28_RS14990 (3000984) | 3000984..3003422 | + | 2439 | WP_000102132.1 | exonuclease | - |
| PQQ28_RS14995 (3003484) | 3003484..3003753 | + | 270 | WP_000003742.1 | excisionase | - |
| PQQ28_RS15000 (3003722) | 3003722..3004840 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| PQQ28_RS15005 (3005007) | 3005007..3005801 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| PQQ28_RS15010 (3005798) | 3005798..3006844 | + | 1047 | WP_000759310.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| PQQ28_RS15015 (3006902) | 3006902..3007363 | + | 462 | WP_001443234.1 | DUF3592 domain-containing protein | - |
| PQQ28_RS15020 (3007360) | 3007360..3008148 | + | 789 | WP_000723290.1 | TPM domain-containing protein | - |
| PQQ28_RS15025 (3008286) | 3008286..3009107 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| PQQ28_RS15030 (3009123) | 3009123..3010034 | - | 912 | WP_000291305.1 | N-acetylglucosamine kinase | - |
| PQQ28_RS15035 (3010063) | 3010063..3011307 | - | 1245 | WP_001251365.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| PQQ28_RS15040 (3011307) | 3011307..3012008 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|