MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 48488 bp
Accession: NZ_CP117232 Location: 1..48488 Organism: Escherichia coli strain ATCC 25922 Replicon: plasmid pATCC25922_4
Accession: NZ_CP117232 Location: 1..48488 Organism: Escherichia coli strain ATCC 25922 Replicon: plasmid pATCC25922_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ28_RS00010 (PQQ28_00010) | 1481..1768 | + | 288 | WP_000356589.1 | hypothetical protein | - |
| PQQ28_RS00015 (PQQ28_00015) | 1792..2055 | + | 264 | WP_000424604.1 | hypothetical protein | - |
| PQQ28_RS00020 (PQQ28_00020) | 2300..2647 | + | 348 | WP_000269913.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ28_RS00025 (PQQ28_00025) | 2647..2946 | + | 300 | WP_001259436.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQQ28_RS00030 (PQQ28_00030) | 3110..3490 | + | 381 | WP_000061764.1 | hypothetical protein | - |
| PQQ28_RS00035 (PQQ28_00035) | 3554..3826 | + | 273 | WP_000148349.1 | helix-turn-helix domain-containing protein | - |
| PQQ28_RS00040 (PQQ28_00040) | 4437..4625 | + | 189 | WP_000986262.1 | hypothetical protein | - |
| PQQ28_RS00045 (PQQ28_00045) | 4636..5778 | - | 1143 | WP_000854799.1 | ORF6N domain-containing protein | - |
| PQQ28_RS00050 (PQQ28_00050) | 5775..5966 | - | 192 | WP_000183352.1 | hypothetical protein | - |
| PQQ28_RS00055 (PQQ28_00055) | 6540..7112 | + | 573 | WP_000137931.1 | helix-turn-helix transcriptional regulator | - |
| PQQ28_RS00060 (PQQ28_00060) | 7884..8132 | - | 249 | WP_000730007.1 | hypothetical protein | - |
| PQQ28_RS00065 (PQQ28_00065) | 8176..8829 | - | 654 | WP_000156167.1 | ParA family protein | - |
| PQQ28_RS00070 (PQQ28_00070) | 8980..9354 | - | 375 | WP_000418975.1 | hypothetical protein | - |
| PQQ28_RS00075 (PQQ28_00075) | 9447..10109 | - | 663 | WP_000839974.1 | helix-turn-helix domain-containing protein | - |
| PQQ28_RS00080 (PQQ28_00080) | 10283..10777 | + | 495 | WP_000143879.1 | hypothetical protein | - |
| PQQ28_RS00085 (PQQ28_00085) | 10774..11289 | + | 516 | WP_000972942.1 | hypothetical protein | - |
| PQQ28_RS00090 (PQQ28_00090) | 11286..11519 | + | 234 | WP_000017467.1 | hypothetical protein | - |
| PQQ28_RS00095 (PQQ28_00095) | 11519..11923 | + | 405 | WP_001014473.1 | Ref family recombination enhancement nuclease | - |
| PQQ28_RS00100 (PQQ28_00100) | 11920..12252 | + | 333 | WP_001270824.1 | DUF1064 domain-containing protein | - |
| PQQ28_RS00105 (PQQ28_00105) | 12256..12633 | + | 378 | WP_001250512.1 | hypothetical protein | - |
| PQQ28_RS00110 (PQQ28_00110) | 12803..13870 | + | 1068 | WP_001041904.1 | DUF3560 domain-containing protein | - |
| PQQ28_RS00115 (PQQ28_00115) | 13948..14229 | + | 282 | WP_000823235.1 | hypothetical protein | - |
| PQQ28_RS00120 (PQQ28_00120) | 14226..14591 | + | 366 | WP_000023818.1 | hypothetical protein | - |
| PQQ28_RS00125 (PQQ28_00125) | 14588..14848 | + | 261 | WP_071526260.1 | hypothetical protein | - |
| PQQ28_RS00130 (PQQ28_00130) | 14841..15485 | + | 645 | WP_001065193.1 | hypothetical protein | - |
| PQQ28_RS00135 (PQQ28_00135) | 15482..16195 | + | 714 | WP_000151167.1 | ead/Ea22-like family protein | - |
| PQQ28_RS00140 (PQQ28_00140) | 16574..16969 | + | 396 | WP_001271967.1 | phage holin family protein | - |
| PQQ28_RS00145 (PQQ28_00145) | 16956..17252 | + | 297 | WP_000254764.1 | phage holin family protein | - |
| PQQ28_RS00150 (PQQ28_00150) | 17236..17781 | + | 546 | WP_024179329.1 | putative peptidoglycan-binding domain-containing protein | - |
| PQQ28_RS00155 (PQQ28_00155) | 17778..18056 | + | 279 | WP_000147212.1 | hypothetical protein | - |
| PQQ28_RS00165 (PQQ28_00165) | 18734..19321 | + | 588 | WP_000387271.1 | MT-A70 family methyltransferase | - |
| PQQ28_RS00170 (PQQ28_00170) | 19433..19702 | + | 270 | WP_000867916.1 | hypothetical protein | - |
| PQQ28_RS00175 (PQQ28_00175) | 19702..19899 | + | 198 | WP_001222808.1 | hypothetical protein | - |
| PQQ28_RS00180 (PQQ28_00180) | 19974..20273 | + | 300 | WP_001141358.1 | hypothetical protein | - |
| PQQ28_RS00185 (PQQ28_00185) | 20460..20612 | + | 153 | WP_001013684.1 | hypothetical protein | - |
| PQQ28_RS00190 (PQQ28_00190) | 20660..21070 | + | 411 | WP_000412080.1 | hypothetical protein | - |
| PQQ28_RS00195 (PQQ28_00195) | 21305..21928 | + | 624 | WP_000160645.1 | ParB/Srx family N-terminal domain-containing protein | - |
| PQQ28_RS00200 (PQQ28_00200) | 21928..23301 | + | 1374 | WP_001443071.1 | ParB N-terminal domain-containing protein | - |
| PQQ28_RS00205 (PQQ28_00205) | 23318..24037 | + | 720 | WP_000775054.1 | hypothetical protein | - |
| PQQ28_RS00210 (PQQ28_00210) | 24595..25185 | + | 591 | WP_001185429.1 | ParB/Srx family N-terminal domain-containing protein | - |
| PQQ28_RS00215 (PQQ28_00215) | 25185..25736 | + | 552 | WP_001019010.1 | hypothetical protein | - |
| PQQ28_RS00220 (PQQ28_00220) | 25742..27598 | + | 1857 | WP_000504844.1 | phage terminase large subunit family protein | - |
| PQQ28_RS00225 (PQQ28_00225) | 27610..27849 | + | 240 | WP_001058287.1 | DUF6148 family protein | - |
| PQQ28_RS00230 (PQQ28_00230) | 27846..29420 | + | 1575 | WP_001022885.1 | phage portal protein | - |
| PQQ28_RS00235 (PQQ28_00235) | 29410..30477 | + | 1068 | WP_050545924.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PQQ28_RS00240 (PQQ28_00240) | 30487..30870 | + | 384 | WP_001209256.1 | hypothetical protein | - |
| PQQ28_RS00245 (PQQ28_00245) | 30891..31934 | + | 1044 | WP_001132883.1 | major capsid protein | - |
| PQQ28_RS00250 (PQQ28_00250) | 31935..32327 | + | 393 | WP_000113177.1 | hypothetical protein | - |
| PQQ28_RS00255 (PQQ28_00255) | 32327..32671 | + | 345 | WP_001083981.1 | hypothetical protein | - |
| PQQ28_RS00260 (PQQ28_00260) | 32668..33153 | + | 486 | WP_000609135.1 | hypothetical protein | - |
| PQQ28_RS00265 (PQQ28_00265) | 33154..33444 | + | 291 | WP_001284547.1 | hypothetical protein | - |
| PQQ28_RS00270 (PQQ28_00270) | 33444..34907 | + | 1464 | WP_000542268.1 | phage tail protein | - |
| PQQ28_RS00275 (PQQ28_00275) | 34924..35445 | + | 522 | WP_000070729.1 | phage major tail tube protein | - |
| PQQ28_RS00280 (PQQ28_00280) | 35455..35736 | + | 282 | WP_000450805.1 | phage tail assembly protein | - |
| PQQ28_RS00285 (PQQ28_00285) | 35891..38683 | + | 2793 | WP_000157872.1 | phage tail tape measure protein | - |
| PQQ28_RS00290 (PQQ28_00290) | 38884..39885 | + | 1002 | WP_000944895.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PQQ28_RS00295 (PQQ28_00295) | 39888..40508 | + | 621 | WP_000998643.1 | phage baseplate assembly protein V | - |
| PQQ28_RS00300 (PQQ28_00300) | 40505..40972 | + | 468 | WP_000635200.1 | phage tail protein | - |
| PQQ28_RS00305 (PQQ28_00305) | 40969..41289 | + | 321 | WP_016265986.1 | hypothetical protein | - |
| PQQ28_RS00310 (PQQ28_00310) | 41286..42410 | + | 1125 | WP_000174657.1 | baseplate J/gp47 family protein | - |
| PQQ28_RS00315 (PQQ28_00315) | 42403..42984 | + | 582 | WP_000763348.1 | phage tail protein I | - |
| PQQ28_RS00320 (PQQ28_00320) | 43015..45423 | + | 2409 | WP_077784313.1 | tail fiber protein | - |
| PQQ28_RS00325 (PQQ28_00325) | 45426..45959 | + | 534 | WP_000972173.1 | tail fiber assembly protein | - |
| PQQ28_RS00330 (PQQ28_00330) | 45988..46515 | - | 528 | WP_000972103.1 | tail fiber assembly protein | - |
| PQQ28_RS00335 (PQQ28_00335) | 46517..47443 | - | 927 | Protein_65 | phage tail protein | - |
| PQQ28_RS00340 (PQQ28_00340) | 47609..48163 | + | 555 | WP_001199265.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|