MGE detailed information
MGE type: Genomic_island MGE length: 20452 bp
Accession: NZ_CP117053 Location: 4272143..4292594 Organism: Escherichia coli strain MLI106K4 Replicon: chromosome
Accession: NZ_CP117053 Location: 4272143..4292594 Organism: Escherichia coli strain MLI106K4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL407_RS21805 (4267622) | 4267622..4268125 | - | 504 | WP_000870585.1 | type 1 fimbria minor subunit FimG | - |
| NL407_RS21810 (4268138) | 4268138..4268668 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| NL407_RS21815 (4268678) | 4268678..4271314 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| NL407_RS21820 (4271381) | 4271381..4272106 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NL407_RS21825 (4272143) | 4272143..4272682 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| NL407_RS21830 (4272747) | 4272747..4273295 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| NL407_RS21835 (4273777) | 4273777..4274373 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| NL407_RS21840 (4274851) | 4274851..4275453 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NL407_RS21845 (4276909) | 4276909..4277625 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NL407_RS21850 (4277645) | 4277645..4278751 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NL407_RS21855 (4278816) | 4278816..4279796 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NL407_RS21860 (4279906) | 4279906..4280111 | + | 206 | Protein_4057 | HNH endonuclease | - |
| NL407_RS21865 (4280411) | 4280411..4281391 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| NL407_RS21870 (4281578) | 4281578..4282818 | - | 1241 | Protein_4059 | helicase YjhR | - |
| NL407_RS21875 (4282934) | 4282934..4283065 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NL407_RS21880 (4283556) | 4283556..4283813 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NL407_RS21885 (4283825) | 4283825..4284370 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NL407_RS21890 (4284426) | 4284426..4285172 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NL407_RS21895 (4285341) | 4285341..4285559 | + | 219 | Protein_4064 | hypothetical protein | - |
| NL407_RS21900 (4285597) | 4285597..4285713 | + | 117 | Protein_4065 | VOC family protein | - |
| NL407_RS21905 (4285958) | 4285958..4287079 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| NL407_RS21910 (4287076) | 4287076..4287354 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NL407_RS21915 (4287366) | 4287366..4288679 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| NL407_RS21920 (4288692) | 4288692..4289498 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| NL407_RS21925 (4289629) | 4289629..4290060 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| NL407_RS21930 (4290072) | 4290072..4290704 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| NL407_RS21935 (4290721) | 4290721..4291503 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NL407_RS21940 (4291806) | 4291806..4292594 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| NL407_RS21945 (4292599) | 4292599..4293504 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| NL407_RS21950 (4293515) | 4293515..4295482 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| NL407_RS21955 (4295589) | 4295589..4296938 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|