MGE detailed information
MGE type: Prophage MGE length: 59746 bp
Accession: NZ_CP117025 Location: 3034942..3094687 Organism: Sphingomonas hankookensis strain SZ.B2R2 Replicon: chromosome
Accession: NZ_CP117025 Location: 3034942..3094687 Organism: Sphingomonas hankookensis strain SZ.B2R2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PPZ50_RS14335 (PPZ50_14315) | 3030059..3030640 | - | 582 | WP_232307914.1 | DUF2062 domain-containing protein | - |
| PPZ50_RS14340 (PPZ50_14320) | 3030633..3031115 | - | 483 | WP_066689565.1 | SsrA-binding protein SmpB | - |
| PPZ50_RS14345 (PPZ50_14325) | 3031304..3033916 | - | 2613 | WP_126013955.1 | ATP-binding protein | - |
| PPZ50_RS14350 (PPZ50_14330) | 3033988..3034872 | - | 885 | WP_066689563.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| PPZ50_RS14355 (PPZ50_14335) | 3034942..3036990 | + | 2049 | WP_232307913.1 | lytic transglycosylase domain-containing protein | - |
| PPZ50_RS14360 (PPZ50_14340) | 3036987..3037469 | + | 483 | WP_066689561.1 | transcription elongation factor GreB | - |
| PPZ50_RS14365 (PPZ50_14345) | 3037494..3037835 | + | 342 | WP_272815356.1 | hypothetical protein | - |
| PPZ50_RS14370 (PPZ50_14350) | 3037941..3039587 | + | 1647 | WP_272815357.1 | YbaL family putative K(+) efflux transporter | - |
| PPZ50_RS14375 (PPZ50_14355) | 3039620..3040396 | + | 777 | WP_272815358.1 | NYN domain-containing protein | - |
| PPZ50_RS14380 (PPZ50_14360) | 3040765..3041946 | - | 1182 | WP_272815359.1 | histidine kinase dimerization/phosphoacceptor domain -containing protein | - |
| PPZ50_RS14385 (PPZ50_14365) | 3041952..3043631 | - | 1680 | WP_272815360.1 | energy-dependent translational throttle protein EttA | - |
| PPZ50_RS14390 (PPZ50_14370) | 3044073..3044306 | + | 234 | WP_241215467.1 | hypothetical protein | - |
| PPZ50_RS14395 (PPZ50_14375) | 3044691..3045862 | + | 1172 | WP_272815361.1 | IS3 family transposase ISGbe1 | Transposase |
| PPZ50_RS14400 (PPZ50_14380) | 3045961..3047853 | + | 1893 | WP_272815362.1 | hypothetical protein | - |
| PPZ50_RS14405 (PPZ50_14385) | 3047892..3049403 | + | 1512 | WP_272815363.1 | IS21 family transposase ISSsp4 | Transposase |
| PPZ50_RS14410 (PPZ50_14390) | 3049390..3050118 | + | 729 | WP_066691143.1 | IS21 family transposase ISSsp4 | Transposase |
| PPZ50_RS14415 (PPZ50_14395) | 3050482..3050745 | + | 264 | WP_272815364.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PPZ50_RS14420 (PPZ50_14400) | 3050738..3051067 | + | 330 | WP_272815365.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| PPZ50_RS14425 (PPZ50_14405) | 3051073..3053109 | - | 2037 | WP_272815366.1 | hypothetical protein | - |
| PPZ50_RS14430 (PPZ50_14410) | 3053394..3053612 | - | 219 | WP_272815367.1 | hypothetical protein | - |
| PPZ50_RS14435 (PPZ50_14415) | 3053873..3054589 | + | 717 | WP_272815368.1 | hypothetical protein | - |
| PPZ50_RS14440 (PPZ50_14420) | 3055400..3056755 | - | 1356 | WP_272815369.1 | SGNH/GDSL hydrolase family protein | - |
| PPZ50_RS14445 (PPZ50_14425) | 3056752..3057081 | - | 330 | WP_272815370.1 | hypothetical protein | - |
| PPZ50_RS14450 (PPZ50_14430) | 3057202..3057642 | - | 441 | WP_272815371.1 | hypothetical protein | - |
| PPZ50_RS14455 (PPZ50_14435) | 3057639..3058103 | - | 465 | WP_272815372.1 | N-acetylmuramoyl-L-alanine amidase | - |
| PPZ50_RS14460 (PPZ50_14440) | 3058148..3058450 | - | 303 | WP_272815373.1 | hypothetical protein | - |
| PPZ50_RS14465 (PPZ50_14445) | 3058447..3058935 | - | 489 | WP_272815374.1 | hypothetical protein | - |
| PPZ50_RS14470 (PPZ50_14450) | 3058932..3059876 | - | 945 | WP_272815375.1 | hypothetical protein | - |
| PPZ50_RS14475 (PPZ50_14455) | 3059887..3062301 | - | 2415 | WP_272815376.1 | GDSL-type esterase/lipase family protein | - |
| PPZ50_RS14480 (PPZ50_14460) | 3062311..3064242 | - | 1932 | WP_272815377.1 | hypothetical protein | - |
| PPZ50_RS14485 (PPZ50_14465) | 3064248..3064667 | - | 420 | WP_272815378.1 | hypothetical protein | - |
| PPZ50_RS14490 (PPZ50_14470) | 3064664..3065221 | - | 558 | WP_272815379.1 | hypothetical protein | - |
| PPZ50_RS14495 (PPZ50_14475) | 3065218..3065811 | - | 594 | WP_272815380.1 | hypothetical protein | - |
| PPZ50_RS14500 (PPZ50_14480) | 3065811..3069278 | - | 3468 | WP_272815381.1 | phage tail tape measure protein | - |
| PPZ50_RS14505 (PPZ50_14485) | 3069349..3070131 | - | 783 | WP_272815382.1 | BRO family protein | - |
| PPZ50_RS14510 (PPZ50_14490) | 3070128..3070448 | - | 321 | WP_272815383.1 | hypothetical protein | - |
| PPZ50_RS14515 (PPZ50_14495) | 3070704..3071114 | - | 411 | WP_272815384.1 | hypothetical protein | - |
| PPZ50_RS14520 (PPZ50_14500) | 3071170..3071391 | - | 222 | WP_272815385.1 | hypothetical protein | - |
| PPZ50_RS14525 (PPZ50_14505) | 3071430..3071843 | - | 414 | WP_272815386.1 | hypothetical protein | - |
| PPZ50_RS14530 (PPZ50_14510) | 3071846..3072274 | - | 429 | WP_272815387.1 | phage tail tube protein | - |
| PPZ50_RS14535 (PPZ50_14515) | 3072301..3072477 | - | 177 | WP_272815388.1 | hypothetical protein | - |
| PPZ50_RS14540 (PPZ50_14520) | 3072501..3072905 | - | 405 | WP_272815389.1 | hypothetical protein | - |
| PPZ50_RS14545 (PPZ50_14525) | 3072902..3073327 | - | 426 | WP_272815390.1 | HK97 gp10 family phage protein | - |
| PPZ50_RS14550 (PPZ50_14530) | 3073324..3073629 | - | 306 | WP_272815391.1 | hypothetical protein | - |
| PPZ50_RS14555 (PPZ50_14535) | 3073635..3073970 | - | 336 | WP_272815392.1 | DUF2190 family protein | - |
| PPZ50_RS14560 (PPZ50_14540) | 3074034..3076322 | - | 2289 | WP_272815393.1 | Mu-like prophage major head subunit gpT family protein | - |
| PPZ50_RS14565 (PPZ50_14545) | 3076329..3077816 | - | 1488 | WP_272815394.1 | phage portal protein | - |
| PPZ50_RS14570 (PPZ50_14550) | 3077838..3078044 | - | 207 | WP_272815395.1 | hypothetical protein | - |
| PPZ50_RS14575 (PPZ50_14555) | 3078041..3080155 | - | 2115 | WP_272815396.1 | phage terminase large subunit family protein | - |
| PPZ50_RS14580 (PPZ50_14560) | 3080158..3080769 | - | 612 | WP_272815397.1 | hypothetical protein | - |
| PPZ50_RS14585 (PPZ50_14565) | 3081047..3081586 | - | 540 | WP_272815398.1 | DUF6362 family protein | - |
| PPZ50_RS14590 (PPZ50_14570) | 3081787..3084804 | - | 3018 | WP_272815399.1 | phage/plasmid primase, P4 family | - |
| PPZ50_RS14595 (PPZ50_14575) | 3084893..3085549 | - | 657 | WP_272815400.1 | hypothetical protein | - |
| PPZ50_RS14600 (PPZ50_14580) | 3085546..3085731 | - | 186 | WP_272815401.1 | conjugal transfer protein TraR | - |
| PPZ50_RS14605 (PPZ50_14585) | 3085724..3086200 | - | 477 | WP_272815402.1 | hypothetical protein | - |
| PPZ50_RS14610 (PPZ50_14590) | 3086188..3086742 | - | 555 | WP_272815403.1 | hypothetical protein | - |
| PPZ50_RS14615 (PPZ50_14595) | 3087035..3087514 | - | 480 | WP_272815404.1 | hypothetical protein | - |
| PPZ50_RS14620 (PPZ50_14600) | 3087511..3087765 | - | 255 | WP_272815405.1 | hypothetical protein | - |
| PPZ50_RS14625 (PPZ50_14605) | 3087762..3087995 | - | 234 | WP_272815406.1 | hypothetical protein | - |
| PPZ50_RS14630 (PPZ50_14610) | 3087978..3088655 | + | 678 | WP_272815407.1 | XRE family transcriptional regulator | - |
| PPZ50_RS14635 (PPZ50_14615) | 3089034..3089312 | + | 279 | WP_272815408.1 | hypothetical protein | - |
| PPZ50_RS14640 (PPZ50_14620) | 3089309..3089437 | + | 129 | WP_272815409.1 | hypothetical protein | - |
| PPZ50_RS14645 (PPZ50_14625) | 3089431..3089718 | + | 288 | WP_272815410.1 | hypothetical protein | - |
| PPZ50_RS14650 (PPZ50_14630) | 3089917..3090378 | + | 462 | WP_272815411.1 | hypothetical protein | - |
| PPZ50_RS14655 (PPZ50_14635) | 3090378..3091109 | + | 732 | WP_272815412.1 | hypothetical protein | - |
| PPZ50_RS14660 (PPZ50_14640) | 3091109..3092893 | + | 1785 | WP_272815413.1 | DNA cytosine methyltransferase | - |
| PPZ50_RS14665 (PPZ50_14645) | 3092890..3093357 | + | 468 | WP_272815414.1 | hypothetical protein | - |
| PPZ50_RS14670 (PPZ50_14650) | 3093354..3093614 | + | 261 | WP_272815415.1 | hypothetical protein | - |
| PPZ50_RS14675 (PPZ50_14655) | 3093614..3094687 | + | 1074 | WP_272815416.1 | hypothetical protein ; Integrase | Integrase |
| PPZ50_RS14680 (PPZ50_14660) | 3094707..3095147 | - | 441 | WP_272815417.1 | hypothetical protein | - |
| PPZ50_RS14685 (PPZ50_14665) | 3095152..3095565 | - | 414 | WP_272815418.1 | hypothetical protein | - |
| PPZ50_RS14690 (PPZ50_14670) | 3095718..3096485 | - | 768 | WP_272815419.1 | TIGR04255 family protein | - |
| PPZ50_RS14705 (PPZ50_14685) | 3096911..3097939 | - | 1029 | WP_066693121.1 | LacI family DNA-binding transcriptional regulator | - |
| PPZ50_RS14710 (PPZ50_14690) | 3098106..3098987 | + | 882 | WP_232308036.1 | ROK family protein | - |
| PPZ50_RS14715 (PPZ50_14695) | 3098984..3099223 | - | 240 | WP_066693127.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|