MGE detailed information
MGE type: Prophage MGE length: 32287 bp
Accession: NZ_CP117020 Location: 954647..986933 Organism: Escherichia coli strain MLI106K3 Replicon: chromosome
Accession: NZ_CP117020 Location: 954647..986933 Organism: Escherichia coli strain MLI106K3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL424_RS04980 () | 950087..951460 | + | 1374 | WP_001328842.1 | MFS transporter | - |
| NL424_RS04985 () | 951506..952387 | - | 882 | WP_000984517.1 | protease HtpX | - |
| NL424_RS04990 () | 952579..954627 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| NL424_RS04995 () | 954647..955345 | - | 699 | WP_001595843.1 | RNA chaperone ProQ | - |
| NL424_RS05000 () | 955442..955939 | - | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| NL424_RS05005 () | 956069..957352 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| NL424_RS05010 () | 957321..959954 | + | 2634 | WP_001306757.1 | Intermembrane transport protein YebT | VF |
| NL424_RS05015 () | 960034..961473 | + | 1440 | WP_049068043.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL424_RS05020 () | 961591..961827 | + | 237 | WP_001295499.1 | YebV family protein | - |
| NL424_RS05025 () | 961932..962123 | + | 192 | WP_001296140.1 | YebW family protein | - |
| NL424_RS05030 () | 962124..962780 | - | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| - | 962877..963148 | + | 272 | - | - | Antitoxin Detail |
| - | 962915..963018 | - | 104 | - | - | Toxin Detail |
| NL424_RS05035 () | 963176..963517 | - | 342 | WP_000976472.1 | YebY family protein | - |
| NL424_RS05040 () | 963530..964402 | - | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| NL424_RS05045 () | 964406..964780 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| NL424_RS05050 () | 964919..965149 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| NL424_RS05055 () | 965251..965907 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| NL424_RS05060 () | 965931..966593 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| NL424_RS05065 () | 966590..968650 | - | 2061 | WP_001551233.1 | oligopeptidase B | - |
| NL424_RS05070 () | 968807..969232 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NL424_RS05075 () | 969289..970458 | + | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NL424_RS05080 () | 970622..971281 | - | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| NL424_RS05085 () | 971608..971964 | - | 357 | WP_001295500.1 | protein YebF | - |
| NL424_RS05090 () | 972031..972321 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| NL424_RS05095 () | 972455..973633 | + | 1179 | WP_255046422.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL424_RS05100 () | 973688..974329 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL424_RS05105 () | 974366..976177 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| NL424_RS05110 () | 976412..977887 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| NL424_RS05115 () | 978225..979094 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| NL424_RS05120 () | 979222..980664 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| NL424_RS05125 () | 980796..981767 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NL424_RS05130 () | 981887..983209 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| NL424_RS05135 () | 983225..984157 | - | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NL424_RS05140 () | 984236..984991 | + | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| NL424_RS05145 () | 984988..985773 | + | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NL424_RS05150 () | 985923..986933 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NL424_RS05155 () | 986942..987553 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| NL424_RS05160 () | 987692..987757 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| NL424_RS05165 () | 987828..988430 | + | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| NL424_RS05170 () | 988432..988953 | - | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NL424_RS05175 () | 988988..989728 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NL424_RS05180 () | 989757..990209 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|