MGE detailed information
MGE type: Genomic_island MGE length: 46663 bp
Accession: NZ_CP117020 Location: 4186248..4232910 Organism: Escherichia coli strain MLI106K3 Replicon: chromosome
Accession: NZ_CP117020 Location: 4186248..4232910 Organism: Escherichia coli strain MLI106K3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL424_RS20355 (4181543) | 4181543..4181944 | + | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| NL424_RS20360 (4181983) | 4181983..4183038 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL424_RS20365 (4183326) | 4183326..4184429 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL424_RS20370 (4184441) | 4184441..4185694 | + | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL424_RS20380 (4185899) | 4185899..4186057 | - | 159 | Protein_3901 | integrase | - |
| NL424_RS20385 (4186149) | 4186149..4186251 | - | 103 | Protein_3902 | helix-turn-helix domain-containing protein | - |
| NL424_RS20390 (4186248) | 4186248..4186718 | - | 471 | WP_000201185.1 | hypothetical protein | - |
| NL424_RS20395 (4187065) | 4187065..4190274 | - | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| NL424_RS20400 (4190590) | 4190590..4191372 | + | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NL424_RS20405 (4191359) | 4191359..4192279 | + | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NL424_RS20410 (4192713) | 4192713..4193597 | - | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| NL424_RS20415 (4193862) | 4193862..4194920 | + | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| NL424_RS20420 (4195062) | 4195062..4196189 | + | 1128 | WP_001550663.1 | MFS transporter | - |
| NL424_RS20425 (4196368) | 4196368..4197321 | - | 954 | WP_001550665.1 | molybdenum cofactor insertion chaperone PaoD | - |
| NL424_RS20430 (4197331) | 4197331..4200078 | - | 2748 | WP_167790183.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| NL424_RS20435 (4200075) | 4200075..4200764 | - | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| NL424_RS20440 (4201170) | 4201170..4201784 | + | 615 | WP_001019920.1 | YagU family protein | - |
| NL424_RS20445 (4202033) | 4202033..4202362 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| NL424_RS20450 (4202675) | 4202675..4203385 | - | 711 | WP_001586708.1 | putative fimbrial chaperone EcpE | VF |
| NL424_RS20455 (4203354) | 4203354..4204997 | - | 1644 | WP_001521920.1 | Fimbria adhesin EcpD | VF |
| NL424_RS20460 (4204987) | 4204987..4207512 | - | 2526 | WP_001131068.1 | putative outer membrane usher protein EcpC | VF |
| NL424_RS20465 (4207538) | 4207538..4208206 | - | 669 | WP_001521922.1 | putative fimbrial chaperone EcpB | VF |
| NL424_RS20470 (4208263) | 4208263..4208850 | - | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NL424_RS20475 (4208925) | 4208925..4209467 | - | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| NL424_RS20480 (4210291) | 4210291..4210516 | + | 226 | Protein_3921 | protein YkgL | - |
| NL424_RS20485 (4210551) | 4210551..4210691 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NL424_RS20490 (4210691) | 4210691..4210954 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NL424_RS20495 (4211284) | 4211284..4211367 | - | 84 | Protein_3924 | hypothetical protein | - |
| NL424_RS20500 (4211886) | 4211886..4213028 | - | 1143 | WP_001595351.1 | NADH-dependent flavin oxidoreductase | - |
| NL424_RS20505 (4213202) | 4213202..4214122 | - | 921 | WP_000860030.1 | alpha/beta hydrolase | - |
| NL424_RS20510 (4214279) | 4214279..4215205 | + | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| NL424_RS20515 (4215405) | 4215405..4216298 | + | 894 | WP_001550671.1 | HTH-type transcriptional regulator PgrR | VF |
| NL424_RS20520 (4216329) | 4216329..4217318 | - | 990 | WP_001172288.1 | aldo/keto reductase | - |
| NL424_RS20525 (4217345) | 4217345..4218196 | - | 852 | WP_001550672.1 | aldo/keto reductase | - |
| NL424_RS20530 (4218761) | 4218761..4223011 | + | 4251 | WP_001550673.1 | hypothetical protein | VF |
| NL424_RS20535 (4223136) | 4223136..4223993 | - | 858 | WP_001309280.1 | Right origin-binding protein | VF |
| NL424_RS20540 (4224241) | 4224241..4225110 | + | 870 | WP_001309281.1 | aldo/keto reductase | - |
| NL424_RS20545 (4225270) | 4225270..4225863 | - | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| NL424_RS20550 (4225875) | 4225875..4226111 | - | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NL424_RS20555 (4226220) | 4226220..4227545 | - | 1326 | WP_001543522.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NL424_RS20560 (4227772) | 4227772..4228626 | + | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NL424_RS20565 (4229154) | 4229154..4229873 | + | 720 | WP_001102122.1 | (Fe-S)-binding protein | - |
| NL424_RS20570 (4229884) | 4229884..4231311 | + | 1428 | WP_001550674.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NL424_RS20575 (4231304) | 4231304..4231999 | + | 696 | WP_001550675.1 | lactate utilization protein C | - |
| NL424_RS20580 (4232242) | 4232242..4232910 | - | 669 | WP_001550676.1 | protein YkgH | - |
| NL424_RS20585 (4233121) | 4233121..4234791 | - | 1671 | WP_001550677.1 | choline dehydrogenase | - |
| NL424_RS20590 (4234805) | 4234805..4236277 | - | 1473 | WP_001550678.1 | betaine-aldehyde dehydrogenase | - |
| NL424_RS20595 (4236291) | 4236291..4236878 | - | 588 | WP_001376735.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|