MGE detailed information
MGE type: Prophage MGE length: 37032 bp
Accession: NZ_CP117016 Location: 4066933..4103964 Organism: Escherichia coli strain MLI121 Replicon: chromosome
Accession: NZ_CP117016 Location: 4066933..4103964 Organism: Escherichia coli strain MLI121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL415_RS20395 (4064463) | 4064463..4065041 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| NL415_RS20400 (4065163) | 4065163..4065930 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NL415_RS20405 (4065901) | 4065901..4066641 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NL415_RS20410 (4066942) | 4066942..4067691 | + | 750 | WP_000093946.1 | hypothetical protein | VF |
| NL415_RS20415 (4067748) | 4067748..4068104 | - | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NL415_RS20420 (4068097) | 4068097..4068375 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| NL415_RS20425 (4068480) | 4068480..4070573 | - | 2094 | WP_001140834.1 | hypothetical protein | VF |
| NL415_RS20430 (4070557) | 4070557..4071696 | - | 1140 | WP_000785671.1 | hypothetical protein | VF |
| NL415_RS20435 (4071686) | 4071686..4072468 | - | 783 | WP_001260509.1 | hypothetical protein | VF |
| NL415_RS20440 (4072470) | 4072470..4072742 | - | 273 | WP_000958542.1 | hypothetical protein | VF |
| NL415_RS20445 (4072745) | 4072745..4073497 | - | 753 | WP_000830275.1 | hypothetical protein | VF |
| NL415_RS20450 (4073494) | 4073494..4073865 | - | 372 | WP_000043127.1 | hypothetical protein | VF |
| NL415_RS20455 (4073858) | 4073858..4074709 | - | 852 | WP_000922509.1 | FliM/FliN family flagellar motor switch protein | - |
| NL415_RS20460 (4075082) | 4075082..4075348 | + | 267 | Protein_3863 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| NL415_RS20465 (4075405) | 4075405..4076102 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| NL415_RS20470 (4076119) | 4076119..4076274 | + | 156 | Protein_3865 | flagellar basal body protein FliL | - |
| NL415_RS20475 (4076294) | 4076294..4077010 | + | 717 | WP_000938719.1 | RNA polymerase sigma factor FliA | VF |
| NL415_RS20480 (4077023) | 4077023..4077886 | + | 864 | WP_001169519.1 | hypothetical protein | VF |
| NL415_RS20485 (4077889) | 4077889..4078812 | + | 924 | WP_001232557.1 | hypothetical protein | VF |
| NL415_RS20490 (4078883) | 4078883..4079938 | + | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| NL415_RS20495 (4079990) | 4079990..4080283 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL415_RS20500 (4080286) | 4080286..4080684 | + | 399 | WP_001263484.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL415_RS20505 (4080694) | 4080694..4081146 | + | 453 | WP_001059899.1 | GNAT family N-acetyltransferase | - |
| NL415_RS20510 (4081391) | 4081391..4081597 | + | 207 | Protein_3873 | RtcB family protein | - |
| NL415_RS20515 (4081593) | 4081593..4081945 | + | 353 | Protein_3874 | peptide chain release factor H | - |
| NL415_RS20520 (4082002) | 4082002..4083459 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| NL415_RS20525 (4083720) | 4083720..4084178 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4084774) | 4084774..4084854 | + | 81 | NuclAT_7 | - | - |
| - (4084774) | 4084774..4084854 | + | 81 | NuclAT_7 | - | - |
| - (4084774) | 4084774..4084854 | + | 81 | NuclAT_7 | - | - |
| - (4084774) | 4084774..4084854 | + | 81 | NuclAT_7 | - | - |
| NL415_RS20530 (4084270) | 4084270..4085514 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| NL415_RS20535 (4085572) | 4085572..4085973 | + | 402 | WP_000174682.1 | sigma factor-binding protein Crl | - |
| NL415_RS20540 (4086012) | 4086012..4087067 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL415_RS20545 (4087355) | 4087355..4088458 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL415_RS20550 (4088470) | 4088470..4089723 | + | 1254 | WP_000893262.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL415_RS20560 (4090078) | 4090078..4091268 | + | 1191 | WP_000979346.1 | hypothetical protein ; Integrase | Integrase |
| NL415_RS20565 (4091265) | 4091265..4092089 | + | 825 | WP_001023348.1 | hypothetical protein | - |
| NL415_RS20570 (4092275) | 4092275..4092421 | + | 147 | WP_227467206.1 | AlpA family phage regulatory protein | - |
| NL415_RS20575 (4092538) | 4092538..4092711 | - | 174 | WP_001605077.1 | hypothetical protein | - |
| NL415_RS20580 (4092843) | 4092843..4093019 | + | 177 | WP_001118612.1 | host cell division inhibitor Icd-like protein | - |
| NL415_RS20585 (4093012) | 4093012..4093371 | + | 360 | WP_001246996.1 | hypothetical protein | - |
| NL415_RS20590 (4093403) | 4093403..4093687 | + | 285 | WP_001027153.1 | hypothetical protein | - |
| NL415_RS20595 (4093684) | 4093684..4094067 | + | 384 | WP_001075580.1 | DUF5375 family protein | - |
| NL415_RS20600 (4094064) | 4094064..4096736 | + | 2673 | WP_000155334.1 | TOPRIM and DUF927 domain-containing protein | - |
| NL415_RS20605 (4097137) | 4097137..4097880 | + | 744 | WP_001066216.1 | hypothetical protein | - |
| NL415_RS20610 (4097877) | 4097877..4098428 | + | 552 | WP_000126946.1 | phage polarity suppression protein | - |
| NL415_RS20615 (4098434) | 4098434..4098706 | + | 273 | WP_001185343.1 | ogr/Delta-like zinc finger family protein | - |
| NL415_RS20620 (4099530) | 4099530..4100498 | + | 969 | WP_000852448.1 | retron St85 family effector protein | - |
| NL415_RS20625 (4100485) | 4100485..4101417 | + | 933 | WP_000351381.1 | retron St85 family RNA-directed DNA polymerase | - |
| NL415_RS20630 (4101412) | 4101412..4101894 | - | 483 | WP_000128896.1 | hypothetical protein | - |
| NL415_RS20635 (4102281) | 4102281..4102511 | - | 231 | Protein_3897 | LysR substrate-binding domain-containing protein | - |
| NL415_RS20640 (4103080) | 4103080..4103964 | - | 885 | WP_001119037.1 | HTH-type transcriptional regulator ArgP | VF |
| NL415_RS20645 (4104229) | 4104229..4105279 | + | 1051 | Protein_3899 | alpha/beta hydrolase | - |
| NL415_RS20650 (4105421) | 4105421..4106548 | + | 1128 | WP_000171074.1 | MFS transporter | - |
| NL415_RS20655 (4106728) | 4106728..4107684 | - | 957 | WP_000122402.1 | molybdenum cofactor insertion chaperone PaoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|