MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95886 bp
Accession: NZ_CP117014 Location: 1..95886 Organism: Escherichia coli strain MLI121 Replicon: plasmid p95_MLI121
Accession: NZ_CP117014 Location: 1..95886 Organism: Escherichia coli strain MLI121 Replicon: plasmid p95_MLI121
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL415_RS00005 (NL415_000005) | 1..861 | + | 861 | WP_000361425.1 | RepB family plasmid replication initiator protein | - |
| NL415_RS00010 (NL415_000010) | 1096..1803 | - | 708 | WP_000021876.1 | hypothetical protein | - |
| NL415_RS00015 (NL415_000015) | 1819..2370 | - | 552 | WP_000189111.1 | hypothetical protein | - |
| NL415_RS00020 (NL415_000020) | 2423..2914 | - | 492 | WP_000012429.1 | hypothetical protein | - |
| NL415_RS00025 (NL415_000025) | 2923..3471 | - | 549 | WP_000870304.1 | hypothetical protein | - |
| NL415_RS00030 (NL415_000030) | 3563..4297 | - | 735 | WP_000801017.1 | hypothetical protein | - |
| NL415_RS00035 (NL415_000035) | 4341..5999 | - | 1659 | WP_001033854.1 | tail sheath protein | - |
| NL415_RS00040 (NL415_000040) | 6067..6345 | - | 279 | WP_024182662.1 | Ig-like domain-containing protein | - |
| NL415_RS00045 (NL415_000045) | 6493..8190 | - | 1698 | WP_069936443.1 | capsid protein | - |
| NL415_RS00050 (NL415_000050) | 8349..8741 | + | 393 | WP_000331486.1 | hypothetical protein | - |
| NL415_RS00055 (NL415_000055) | 8758..9216 | + | 459 | WP_047648349.1 | hypothetical protein | - |
| NL415_RS00060 (NL415_000060) | 9370..9828 | - | 459 | WP_257865476.1 | hypothetical protein | - |
| NL415_RS00065 (NL415_000065) | 9899..10705 | - | 807 | WP_001350910.1 | hypothetical protein | - |
| NL415_RS00070 (NL415_000070) | 10705..10989 | - | 285 | WP_001272819.1 | PAAR domain-containing protein | - |
| NL415_RS00075 (NL415_000075) | 11256..12212 | + | 957 | WP_032323035.1 | plasmid segregation protein ParM | - |
| NL415_RS00080 (NL415_000080) | 12225..12563 | + | 339 | WP_000076909.1 | plasmid partitioning/stability family protein | - |
| NL415_RS00085 (NL415_000085) | 12851..13492 | + | 642 | WP_000585022.1 | AAA family ATPase | - |
| NL415_RS00090 (NL415_000090) | 13485..13772 | + | 288 | WP_000595051.1 | hypothetical protein | - |
| NL415_RS00095 (NL415_000095) | 14041..15702 | + | 1662 | WP_001287146.1 | glutamine--tRNA ligase | - |
| NL415_RS00100 (NL415_000100) | 15751..17826 | - | 2076 | WP_235636551.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| NL415_RS00105 (NL415_000105) | 17891..18796 | - | 906 | WP_032323280.1 | recombination-associated protein RdgC | - |
| NL415_RS00110 (NL415_000110) | 18856..19509 | - | 654 | WP_000828870.1 | hypothetical protein | - |
| NL415_RS00115 (NL415_000115) | 19506..20486 | - | 981 | WP_126720667.1 | tail length tape measure protein | - |
| NL415_RS00120 (NL415_000120) | 20490..21257 | - | 768 | WP_000203294.1 | hypothetical protein | - |
| NL415_RS00125 (NL415_000125) | 21254..22045 | - | 792 | WP_000532310.1 | hypothetical protein | - |
| NL415_RS00130 (NL415_000130) | 22191..22493 | + | 303 | WP_000692028.1 | type II toxin-antitoxin system HigB family toxin | - |
| NL415_RS00135 (NL415_000135) | 22497..22856 | + | 360 | WP_001022419.1 | transcriptional regulator | - |
| NL415_RS00140 (NL415_000140) | 22917..23648 | + | 732 | WP_174714722.1 | hypothetical protein | - |
| NL415_RS00145 (NL415_000145) | 23682..24878 | - | 1197 | WP_001112630.1 | hypothetical protein | - |
| NL415_RS00150 (NL415_000150) | 24871..25200 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| NL415_RS00155 (NL415_000155) | 25509..26162 | - | 654 | WP_000410954.1 | hypothetical protein | - |
| NL415_RS00160 (NL415_000160) | 26446..27054 | + | 609 | WP_000776951.1 | hypothetical protein | - |
| NL415_RS00165 (NL415_000165) | 27075..27467 | + | 393 | WP_223231463.1 | hypothetical protein | - |
| NL415_RS00170 (NL415_000170) | 27556..28173 | - | 618 | WP_001050887.1 | dCTP deaminase | - |
| NL415_RS00175 (NL415_000175) | 28170..29243 | - | 1074 | WP_000879262.1 | hypothetical protein | - |
| NL415_RS00180 (NL415_000180) | 29243..29548 | - | 306 | WP_000964983.1 | hypothetical protein | - |
| NL415_RS00185 (NL415_000185) | 29875..30162 | - | 288 | WP_001557717.1 | hypothetical protein | - |
| NL415_RS00190 (NL415_000190) | 30222..31148 | - | 927 | WP_077888150.1 | Rha family transcriptional regulator | - |
| NL415_RS00195 (NL415_000195) | 31148..31363 | - | 216 | WP_022630900.1 | host cell division inhibitor Icd-like protein | - |
| NL415_RS00200 (NL415_000200) | 31385..31507 | - | 123 | Protein_39 | ash family protein | - |
| NL415_RS00205 (NL415_000205) | 31675..31842 | - | 168 | WP_162983138.1 | hypothetical protein | - |
| NL415_RS00210 (NL415_000210) | 32174..32752 | - | 579 | WP_077888149.1 | Ref family recombination enhancement nuclease | - |
| NL415_RS00215 (NL415_000215) | 33025..33636 | + | 612 | WP_064763138.1 | DUF4406 domain-containing protein | - |
| NL415_RS00220 (NL415_000220) | 33666..33950 | + | 285 | WP_048663733.1 | DNA-binding protein | - |
| NL415_RS00225 (NL415_000225) | 33940..34443 | + | 504 | WP_000834213.1 | hypothetical protein | - |
| NL415_RS00230 (NL415_000230) | 34447..34695 | + | 249 | WP_097507118.1 | hypothetical protein | - |
| NL415_RS00235 (NL415_000235) | 34692..34967 | + | 276 | WP_001018058.1 | DUF4752 family protein | - |
| NL415_RS00240 (NL415_000240) | 34964..35188 | + | 225 | WP_000139733.1 | hypothetical protein | - |
| NL415_RS00245 (NL415_000245) | 35185..35496 | + | 312 | WP_001092152.1 | hypothetical protein | - |
| NL415_RS00250 (NL415_000250) | 35767..36720 | + | 954 | WP_024186112.1 | DUF968 domain-containing protein | - |
| NL415_RS00255 (NL415_000255) | 36734..37027 | + | 294 | WP_257865475.1 | hypothetical protein | - |
| NL415_RS00260 (NL415_000260) | 37020..37664 | + | 645 | WP_001065193.1 | hypothetical protein | - |
| NL415_RS00265 (NL415_000265) | 37661..38374 | + | 714 | WP_000151168.1 | ead/Ea22-like family protein | - |
| NL415_RS00270 (NL415_000270) | 38371..38781 | + | 411 | WP_000738190.1 | hypothetical protein | - |
| NL415_RS00275 (NL415_000275) | 38789..39187 | + | 399 | Protein_54 | hypothetical protein | - |
| NL415_RS00280 (NL415_000280) | 39309..40064 | + | 756 | WP_089629838.1 | ead/Ea22-like family protein | - |
| NL415_RS00285 (NL415_000285) | 40066..40191 | + | 126 | Protein_56 | hypothetical protein | - |
| NL415_RS00290 (NL415_000290) | 40478..40741 | + | 264 | WP_089629837.1 | hypothetical protein | - |
| NL415_RS00295 (NL415_000295) | 40752..40877 | + | 126 | Protein_58 | hypothetical protein | - |
| NL415_RS00300 (NL415_000300) | 40899..41375 | + | 477 | Protein_59 | dTDP-6-deoxy-L-hexose 3-O-methyltransferase | - |
| NL415_RS00305 (NL415_000305) | 41364..42272 | + | 909 | WP_235636550.1 | hypothetical protein | - |
| NL415_RS00310 (NL415_000310) | 42256..42540 | + | 285 | WP_001142395.1 | hypothetical protein | - |
| NL415_RS00315 (NL415_000315) | 42540..42845 | + | 306 | WP_000988220.1 | hypothetical protein | - |
| NL415_RS00320 (NL415_000320) | 42842..43366 | + | 525 | WP_000159955.1 | toprim domain-containing protein | - |
| NL415_RS00325 (NL415_000325) | 43614..44003 | + | 390 | WP_000506732.1 | S24 family peptidase | - |
| NL415_RS00330 (NL415_000330) | 44138..44560 | + | 423 | WP_000098854.1 | hypothetical protein | - |
| NL415_RS00335 (NL415_000335) | 44669..44890 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL415_RS00340 (NL415_000340) | 44890..45270 | + | 381 | WP_001216040.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NL415_RS00345 (NL415_000345) | 45306..46400 | - | 1095 | WP_000201932.1 | hypothetical protein | - |
| NL415_RS00350 (NL415_000350) | 46390..47157 | - | 768 | WP_000446290.1 | hypothetical protein | - |
| NL415_RS00355 (NL415_000355) | 47164..47604 | - | 441 | WP_001061875.1 | DUF2829 domain-containing protein | - |
| NL415_RS00360 (NL415_000360) | 47619..48113 | - | 495 | WP_000640907.1 | dUTP diphosphatase | - |
| NL415_RS00365 (NL415_000365) | 48110..48586 | - | 477 | WP_000861172.1 | hypothetical protein | - |
| NL415_RS00370 (NL415_000370) | 48583..48927 | - | 345 | WP_001191775.1 | hypothetical protein | - |
| NL415_RS00375 (NL415_000375) | 49001..50029 | - | 1029 | WP_001292231.1 | tyrosine-type recombinase/integrase | - |
| NL415_RS00380 (NL415_000380) | 50424..51461 | + | 1038 | WP_023908617.1 | hypothetical protein | - |
| NL415_RS00385 (NL415_000385) | 51489..52997 | - | 1509 | WP_000897063.1 | hypothetical protein | - |
| NL415_RS00390 (NL415_000390) | 52997..54361 | - | 1365 | WP_000060660.1 | hypothetical protein | - |
| NL415_RS00395 (NL415_000395) | 54358..54750 | - | 393 | WP_000435256.1 | hypothetical protein | - |
| NL415_RS00400 (NL415_000400) | 54859..55209 | - | 351 | WP_257865474.1 | hypothetical protein | - |
| NL415_RS00405 (NL415_000405) | 55251..55826 | - | 576 | WP_000928281.1 | hypothetical protein | - |
| NL415_RS00415 (NL415_000415) | 56364..56495 | - | 132 | WP_255097511.1 | hypothetical protein | - |
| NL415_RS00440 (NL415_000440) | 57682..57906 | + | 225 | WP_000622155.1 | hypothetical protein | - |
| NL415_RS00445 (NL415_000445) | 58809..60017 | - | 1209 | WP_000077919.1 | hypothetical protein | - |
| NL415_RS00450 (NL415_000450) | 60427..60612 | - | 186 | WP_001369335.1 | hypothetical protein | - |
| NL415_RS00455 (NL415_000455) | 60642..60950 | - | 309 | WP_001350898.1 | VRR-NUC domain-containing protein | - |
| NL415_RS00460 (NL415_000460) | 61273..61533 | - | 261 | WP_001230915.1 | hypothetical protein | - |
| NL415_RS00465 (NL415_000465) | 61536..61970 | - | 435 | WP_000209223.1 | hypothetical protein | - |
| NL415_RS00470 (NL415_000470) | 62007..68843 | - | 6837 | WP_257865473.1 | SNF2-related protein | - |
| NL415_RS00475 (NL415_000475) | 68995..69480 | + | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| NL415_RS00480 (NL415_000480) | 69513..69710 | - | 198 | WP_001344836.1 | hypothetical protein | - |
| NL415_RS00485 (NL415_000485) | 69710..70417 | - | 708 | WP_000510451.1 | Rha family transcriptional regulator | - |
| NL415_RS00490 (NL415_000490) | 70417..70641 | - | 225 | WP_000245717.1 | host cell division inhibitor Icd-like protein | - |
| NL415_RS00495 (NL415_000495) | 71055..72017 | - | 963 | WP_119743298.1 | lytic replication protein | - |
| NL415_RS00500 (NL415_000500) | 72218..73216 | - | 999 | WP_086200632.1 | head processing protein | - |
| NL415_RS00505 (NL415_000505) | 73230..74912 | - | 1683 | WP_257865472.1 | portal protein | - |
| NL415_RS00510 (NL415_000510) | 75096..75398 | + | 303 | WP_032323250.1 | hypothetical protein | - |
| NL415_RS00515 (NL415_000515) | 75510..75674 | + | 165 | WP_164843726.1 | XRE family transcriptional regulator | - |
| NL415_RS00520 (NL415_000520) | 75709..76002 | - | 294 | WP_257865471.1 | hypothetical protein | - |
| NL415_RS00525 (NL415_000525) | 75992..79033 | - | 3042 | WP_047648394.1 | hypothetical protein | - |
| NL415_RS00530 (NL415_000530) | 79127..79495 | - | 369 | WP_000156174.1 | hypothetical protein | - |
| NL415_RS00535 (NL415_000535) | 79495..81420 | - | 1926 | WP_089477122.1 | head protein | - |
| NL415_RS00540 (NL415_000540) | 81413..82033 | - | 621 | WP_000066532.1 | hypothetical protein | - |
| NL415_RS00545 (NL415_000545) | 82023..82469 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| NL415_RS00550 (NL415_000550) | 82469..82795 | - | 327 | WP_000457141.1 | holin | - |
| NL415_RS00555 (NL415_000555) | 83012..83584 | - | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NL415_RS00560 (NL415_000560) | 84012..84452 | + | 441 | WP_001174920.1 | tail fiber assembly protein | - |
| NL415_RS00565 (NL415_000565) | 84424..85017 | - | 594 | WP_000805575.1 | tail fiber assembly protein | - |
| NL415_RS00570 (NL415_000570) | 85017..87620 | - | 2604 | WP_272774155.1 | tail fiber protein | - |
| NL415_RS00575 (NL415_000575) | 87623..88069 | - | 447 | WP_023908646.1 | hypothetical protein | - |
| NL415_RS00580 (NL415_000580) | 88164..89009 | - | 846 | WP_023908647.1 | hypothetical protein | - |
| NL415_RS00585 (NL415_000585) | 89020..90450 | - | 1431 | WP_000156299.1 | hypothetical protein | - |
| NL415_RS00590 (NL415_000590) | 90447..90821 | - | 375 | WP_000965100.1 | hypothetical protein | - |
| NL415_RS00595 (NL415_000595) | 90827..94696 | - | 3870 | WP_257865477.1 | transglycosylase | - |
| NL415_RS00600 (NL415_000600) | 94711..95532 | - | 822 | WP_001025048.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|