MGE detailed information
MGE type: Genomic_island MGE length: 62776 bp
Accession: NZ_CP117013 Location: 3183088..3245863 Organism: Escherichia coli strain MLI114 Replicon: chromosome
Accession: NZ_CP117013 Location: 3183088..3245863 Organism: Escherichia coli strain MLI114 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL414_RS16170 (3178550) | 3178550..3179707 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| NL414_RS16175 (3179715) | 3179715..3181196 | - | 1482 | WP_001605229.1 | cardiolipin synthase ClsC | - |
| NL414_RS16180 (3181138) | 3181138..3181671 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| NL414_RS16185 (3181766) | 3181766..3182077 | - | 312 | WP_000489565.1 | type 1 fimbrial protein | - |
| NL414_RS16190 (3182198) | 3182198..3182530 | - | 333 | WP_000992814.1 | curli assembly chaperone CsgC | - |
| NL414_RS16195 (3182589) | 3182589..3183047 | - | 459 | WP_000771429.1 | curli major subunit CsgA | - |
| NL414_RS16200 (3183088) | 3183088..3183543 | - | 456 | WP_001469343.1 | Minor curlin subunit | VF |
| NL414_RS16205 (3184298) | 3184298..3184948 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| NL414_RS16210 (3184953) | 3184953..3185342 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| NL414_RS16215 (3185367) | 3185367..3185783 | + | 417 | WP_001264096.1 | Curli production assembly/transport component CsgF | VF |
| NL414_RS16220 (3185810) | 3185810..3186643 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| NL414_RS16225 (3186707) | 3186707..3187198 | - | 492 | WP_032159295.1 | DUF1097 domain-containing protein | - |
| NL414_RS16230 (3187300) | 3187300..3187854 | - | 555 | WP_001001926.1 | molecular chaperone YcdY | - |
| NL414_RS16235 (3187878) | 3187878..3188615 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| NL414_RS16240 (3188670) | 3188670..3189608 | - | 939 | WP_000351297.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| NL414_RS16250 (3190079) | 3190079..3190921 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| NL414_RS16255 (3191006) | 3191006..3191203 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| NL414_RS16260 (3191215) | 3191215..3191706 | - | 492 | WP_000976857.1 | DUF5983 family protein | - |
| NL414_RS16265 (3191703) | 3191703..3192077 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | Toxin Detail |
| NL414_RS16270 (3192124) | 3192124..3192498 | - | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NL414_RS16275 (3192661) | 3192661..3192882 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| NL414_RS16280 (3192945) | 3192945..3193421 | - | 477 | WP_001186726.1 | RadC family protein | - |
| NL414_RS16285 (3193437) | 3193437..3193922 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| NL414_RS16290 (3194014) | 3194014..3194835 | - | 822 | WP_001761104.1 | DUF932 domain-containing protein | - |
| NL414_RS16295 (3194936) | 3194936..3195144 | - | 209 | Protein_3096 | DUF905 family protein | - |
| NL414_RS16300 (3195245) | 3195245..3195700 | - | 456 | WP_000581506.1 | IrmA family protein | - |
| NL414_RS16305 (3195776) | 3195776..3198292 | - | 2517 | WP_001531238.1 | hypothetical protein | - |
| NL414_RS16310 (3198413) | 3198413..3201259 | - | 2847 | WP_000820576.1 | Ag43/Cah family autotransporter adhesin | - |
| NL414_RS16315 (3201632) | 3201632..3202504 | - | 873 | WP_001069825.1 | 50S ribosome-binding GTPase | - |
| NL414_RS16320 (3202720) | 3202720..3203664 | - | 945 | WP_032171640.1 | hypothetical protein | - |
| NL414_RS16325 (3204127) | 3204127..3204381 | - | 255 | WP_154670580.1 | hypothetical protein | - |
| NL414_RS16330 (3204663) | 3204663..3204902 | + | 240 | WP_001431807.1 | hypothetical protein | - |
| NL414_RS16335 (3204942) | 3204942..3207380 | + | 2439 | WP_000985465.1 | type I restriction-modification system subunit M | - |
| NL414_RS16340 (3207380) | 3207380..3208714 | + | 1335 | WP_000228013.1 | restriction endonuclease subunit S | - |
| NL414_RS16345 (3208727) | 3208727..3209383 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| NL414_RS16350 (3209380) | 3209380..3210447 | + | 1068 | WP_000634203.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| NL414_RS16355 (3210466) | 3210466..3213561 | + | 3096 | WP_000108735.1 | HsdR family type I site-specific deoxyribonuclease | - |
| NL414_RS16360 (3213561) | 3213561..3214277 | + | 717 | WP_257844107.1 | SprT family zinc-dependent metalloprotease | - |
| NL414_RS16365 (3214622) | 3214622..3215236 | + | 615 | Protein_3110 | IS3 family transposase ISSd1 | Transposase |
| NL414_RS16370 (3215279) | 3215279..3216148 | - | 870 | Protein_3111 | Serine protease EspP | VF |
| NL414_RS16375 (3216175) | 3216175..3216942 | + | 768 | Protein_3112 | IS5 family transposase | - |
| NL414_RS16380 (3217059) | 3217059..3217856 | - | 798 | WP_021523955.1 | AraC family transcriptional regulator | - |
| NL414_RS16385 (3218269) | 3218269..3219387 | + | 1119 | Protein_3114 | IS3 family transposase IS3 | Transposase |
| NL414_RS16390 (3219415) | 3219415..3219558 | - | 144 | Protein_3115 | IS66 family transposase ISCro1 | Transposase |
| NL414_RS16395 (3219722) | 3219722..3220693 | - | 972 | WP_021543695.1 | IS481 family transposase ISEc18 | Transposase |
| NL414_RS16400 (3220750) | 3220750..3221202 | + | 453 | WP_023356211.1 | group II intron maturase-specific domain-containing protein | - |
| NL414_RS16405 (3221262) | 3221262..3222308 | - | 1047 | WP_021543694.1 | hypothetical protein | - |
| NL414_RS16410 (3222486) | 3222486..3223115 | - | 630 | WP_021527210.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| NL414_RS16415 (3223096) | 3223096..3223887 | - | 792 | WP_272749945.1 | hypothetical protein | - |
| NL414_RS16420 (3223817) | 3223817..3225055 | - | 1239 | WP_023356213.1 | TolC family protein | - |
| NL414_RS16425 (3225052) | 3225052..3226194 | - | 1143 | WP_021523949.1 | FtsX-like permease family protein | - |
| NL414_RS16430 (3226381) | 3226381..3227052 | - | 672 | Protein_3123 | IS66 family transposase ISSfl3 | Transposase |
| NL414_RS16435 (3227102) | 3227102..3227938 | + | 837 | Protein_3124 | IS481 family transposase ISErsp1 | Transposase |
| NL414_RS16440 (3228133) | 3228133..3228480 | - | 348 | WP_021543690.1 | hypothetical protein | VF |
| NL414_RS16445 (3229006) | 3229006..3229461 | - | 456 | WP_162752278.1 | hypothetical protein | - |
| NL414_RS16450 (3229632) | 3229632..3230066 | - | 435 | WP_021523944.1 | Protein AggB | VF |
| NL414_RS16455 (3230082) | 3230082..3232676 | - | 2595 | WP_077577668.1 | F1 capsule-anchoring protein | VF |
| NL414_RS16460 (3232707) | 3232707..3233465 | - | 759 | WP_032145366.1 | Chaperone protein caf1M | VF |
| NL414_RS16465 (3233774) | 3233774..3233896 | - | 123 | Protein_3130 | IS630 family transposase | - |
| NL414_RS16470 (3233929) | 3233929..3235194 | + | 1266 | Protein_3131 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NL414_RS16475 (3235298) | 3235298..3236527 | + | 1230 | WP_023356221.1 | Enterochelin esterase | VF |
| NL414_RS16480 (3236612) | 3236612..3237569 | + | 958 | Protein_3133 | hypothetical protein | VF |
| NL414_RS16485 (3237614) | 3237614..3238345 | - | 732 | Protein_3134 | Ferrienterobactin receptor | VF |
| NL414_RS16490 (3238393) | 3238393..3239763 | + | 1371 | Protein_3135 | IS3-like element IS150 family transposase | - |
| NL414_RS16495 (3239790) | 3239790..3239945 | - | 156 | Protein_3136 | TonB-dependent receptor | - |
| NL414_RS16500 (3240403) | 3240403..3240558 | - | 156 | Protein_3137 | tellurite resistance protein | - |
| NL414_RS16505 (3240821) | 3240821..3241078 | - | 258 | Protein_3138 | replication endonuclease | - |
| NL414_RS16510 (3241244) | 3241244..3241354 | + | 111 | Protein_3139 | transposase domain-containing protein | - |
| NL414_RS16515 (3241486) | 3241486..3242499 | - | 1014 | WP_000107484.1 | aldose 1-epimerase family protein | - |
| NL414_RS16520 (3242511) | 3242511..3243827 | - | 1317 | WP_000998343.1 | L-fucose:H+ symporter permease | - |
| NL414_RS16525 (3243855) | 3243855..3244775 | - | 921 | WP_000350265.1 | ribokinase | - |
| NL414_RS16530 (3245081) | 3245081..3245863 | + | 783 | WP_001411493.1 | DeoR family transcriptional regulator | - |
| NL414_RS16535 (3245865) | 3245865..3246091 | - | 227 | Protein_3144 | acetolactate synthase small subunit | - |
| NL414_RS16540 (3246771) | 3246771..3246908 | - | 138 | WP_001411495.1 | hypothetical protein | - |
| NL414_RS16545 (3247058) | 3247058..3248225 | + | 1168 | Protein_3146 | UxaA family hydrolase | - |
| NL414_RS16550 (3248288) | 3248288..3249112 | - | 825 | WP_000072197.1 | aga operon transcriptional regulator AgaR | - |
| NL414_RS16555 (3249361) | 3249361..3249435 | + | 75 | Protein_3148 | aldolase | - |
| NL414_RS16560 (3249415) | 3249415..3249699 | + | 285 | WP_077625861.1 | class II fructose-bisphosphate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|