MGE detailed information
MGE type: Conjugative plasmid MGE length: 80847 bp
Accession: NZ_CP117011 Location: 1..80847 Organism: Escherichia coli strain MLI114 Replicon: plasmid p80_MLI114
Accession: NZ_CP117011 Location: 1..80847 Organism: Escherichia coli strain MLI114 Replicon: plasmid p80_MLI114
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL414_RS00005 (1) | 1..1032 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| NL414_RS00010 (1728) | 1728..1868 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| NL414_RS00015 (2101) | 2101..2610 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| NL414_RS00020 (2666) | 2666..3268 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| NL414_RS00025 (3622) | 3622..4968 | + | 1347 | WP_001703911.1 | protein YagA | - |
| NL414_RS00030 (5498) | 5498..5800 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| NL414_RS00035 (5797) | 5797..6423 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| NL414_RS00040 (6635) | 6635..7906 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| NL414_RS00045 (7906) | 7906..8343 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL414_RS00050 (8340) | 8340..8588 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NL414_RS00055 (9007) | 9007..9909 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| NL414_RS00060 (9913) | 9913..10218 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| NL414_RS00065 (10294) | 10294..10977 | + | 684 | WP_001401756.1 | DNA methylase | - |
| NL414_RS00070 (10978) | 10978..11199 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| NL414_RS00075 (11093) | 11093..11647 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| NL414_RS00080 (11692) | 11692..12462 | + | 771 | WP_063117894.1 | hypothetical protein | - |
| NL414_RS00085 (12877) | 12877..13302 | + | 426 | WP_063080242.1 | antirestriction protein | - |
| NL414_RS00090 (13349) | 13349..13771 | + | 423 | WP_077466917.1 | DUF1380 family protein | - |
| NL414_RS00095 (13768) | 13768..13959 | + | 192 | WP_069044558.1 | hypothetical protein | - |
| NL414_RS00100 (14030) | 14030..14344 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| NL414_RS00105 (14728) | 14728..15255 | + | 528 | WP_001276104.1 | single-stranded DNA-binding protein | - |
| NL414_RS00110 (15313) | 15313..15546 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NL414_RS00115 (15605) | 15605..17563 | + | 1959 | WP_257843940.1 | ParB/RepB/Spo0J family partition protein | - |
| NL414_RS00120 (17616) | 17616..18050 | + | 435 | WP_001579792.1 | conjugation system SOS inhibitor PsiB | - |
| NL414_RS00125 (18047) | 18047..18766 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NL414_RS00130 (18763) | 18763..19418 | + | 656 | Protein_25 | hypothetical protein | - |
| NL414_RS00135 (19880) | 19880..20380 | + | 501 | WP_021545156.1 | antirestriction protein ArdA | - |
| NL414_RS00140 (21109) | 21109..21543 | + | 435 | WP_031942440.1 | hypothetical protein | - |
| NL414_RS00145 (21637) | 21637..21903 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NL414_RS00150 (22080) | 22080..22469 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| NL414_RS00155 (22466) | 22466..23368 | + | 903 | WP_031942441.1 | Recombination-promoting nuclease RpnA | VF |
| NL414_RS00160 (23430) | 23430..23636 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| NL414_RS00165 (23667) | 23667..23918 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NL414_RS00170 (24498) | 24498..25346 | + | 849 | WP_257843844.1 | DUF4942 domain-containing protein | - |
| NL414_RS00175 (25433) | 25433..25768 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NL414_RS00180 (26002) | 26002..26334 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NL414_RS00185 (26345) | 26345..29044 | + | 2700 | WP_257843842.1 | Protein TraI | Relaxase |
| NL414_RS00190 (29082) | 29082..31373 | - | 2292 | WP_001289278.1 | F-type conjugative transfer protein TrbC | - |
| NL414_RS00195 (31366) | 31366..32436 | - | 1071 | WP_031942445.1 | IncI1-type conjugal transfer protein TrbB | - |
| NL414_RS00200 (32455) | 32455..33663 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| NL414_RS00205 (33969) | 33969..35054 | - | 1086 | WP_074446708.1 | protein finQ | - |
| - (35263) | 35263..35323 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (35263) | 35263..35323 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (35263) | 35263..35323 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (35263) | 35263..35323 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| NL414_RS00210 (35375) | 35375..35527 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| NL414_RS00215 (35599) | 35599..35850 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NL414_RS00220 (36351) | 36351..36446 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| NL414_RS00225 (36511) | 36511..36687 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| NL414_RS00230 (37079) | 37079..37288 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NL414_RS00235 (37360) | 37360..38022 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL414_RS00240 (38093) | 38093..40261 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| NL414_RS00245 (40358) | 40358..40942 | - | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| NL414_RS00250 (40971) | 40971..42173 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NL414_RS00255 (42140) | 42140..42754 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NL414_RS00260 (42754) | 42754..45798 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| NL414_RS00265 (45888) | 45888..46688 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NL414_RS00270 (46672) | 46672..46860 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NL414_RS00275 (46924) | 46924..47328 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| NL414_RS00280 (47379) | 47379..47906 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NL414_RS00285 (47906) | 47906..48610 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| NL414_RS00290 (48610) | 48610..49899 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| NL414_RS00295 (49902) | 49902..50885 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| NL414_RS00300 (50896) | 50896..51588 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NL414_RS00305 (51585) | 51585..51932 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NL414_RS00310 (51950) | 51950..55717 | - | 3768 | WP_023518849.1 | DUF5710 domain-containing protein | - |
| NL414_RS00315 (55807) | 55807..56358 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| NL414_RS00320 (56373) | 56373..56663 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| NL414_RS00325 (56660) | 56660..57808 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| NL414_RS00330 (57805) | 57805..58623 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| NL414_RS00335 (58620) | 58620..59078 | - | 459 | WP_001079807.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL414_RS00340 (59473) | 59473..60057 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NL414_RS00345 (60117) | 60117..61319 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| NL414_RS00350 (61405) | 61405..62229 | - | 825 | WP_197314785.1 | conjugal transfer protein TraE | - |
| NL414_RS00355 (62380) | 62380..63534 | - | 1155 | WP_001139956.1 | site-specific integrase | - |
| NL414_RS00360 (65168) | 65168..66604 | - | 1437 | WP_000527428.1 | hypothetical protein | VF |
| NL414_RS00365 (66592) | 66592..67248 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| NL414_RS00370 (67233) | 67233..67793 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| NL414_RS00375 (67803) | 67803..68417 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| NL414_RS00380 (68434) | 68434..69519 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NL414_RS00385 (69532) | 69532..71085 | - | 1554 | WP_257843958.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| NL414_RS00390 (71096) | 71096..71548 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| NL414_RS00395 (71535) | 71535..72830 | - | 1296 | WP_023518855.1 | type 4b pilus protein PilO2 | - |
| NL414_RS00400 (72823) | 72823..74505 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| NL414_RS00405 (74519) | 74519..74956 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| NL414_RS00410 (74956) | 74956..76023 | - | 1068 | WP_197314788.1 | hypothetical protein | VF |
| NL414_RS00415 (77070) | 77070..77324 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NL414_RS00420 (77496) | 77496..78179 | - | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| NL414_RS00425 (78433) | 78433..78966 | - | 534 | WP_001712498.1 | transcription termination/antitermination NusG family protein | - |
| NL414_RS00430 (79408) | 79408..79695 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NL414_RS00435 (79733) | 79733..79891 | - | 159 | Protein_86 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|