MGE detailed information
MGE type: Prophage MGE length: 53769 bp
Accession: NZ_CP117006 Location: 3812466..3866234 Organism: Escherichia coli strain MLI108K3 Replicon: chromosome
Accession: NZ_CP117006 Location: 3812466..3866234 Organism: Escherichia coli strain MLI108K3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL411_RS20035 (3808742) | 3808742..3809695 | + | 954 | WP_001550665.1 | molybdenum cofactor insertion chaperone PaoD | - |
| NL411_RS20040 (3809874) | 3809874..3811001 | - | 1128 | WP_001550663.1 | MFS transporter | - |
| NL411_RS20045 (3811143) | 3811143..3812201 | - | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| NL411_RS20050 (3812466) | 3812466..3813350 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| NL411_RS20055 (3813784) | 3813784..3814704 | - | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NL411_RS20060 (3814691) | 3814691..3815473 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NL411_RS20065 (3815789) | 3815789..3818998 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| NL411_RS20070 (3819345) | 3819345..3819815 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| NL411_RS20075 (3819812) | 3819812..3819914 | + | 103 | Protein_3610 | helix-turn-helix domain-containing protein | - |
| NL411_RS20080 (3820006) | 3820006..3820164 | + | 159 | Protein_3611 | integrase | - |
| NL411_RS20085 (3820478) | 3820478..3821134 | - | 657 | WP_016242483.1 | DUF1796 family putative cysteine peptidase | - |
| NL411_RS20090 (3821330) | 3821330..3821866 | + | 537 | WP_060579112.1 | GDSL-type esterase/lipase family protein | - |
| NL411_RS20095 (3821986) | 3821986..3824385 | - | 2400 | WP_029701265.1 | phage head-binding domain-containing protein | - |
| NL411_RS20100 (3824550) | 3824550..3826829 | - | 2280 | WP_255091783.1 | lytic transglycosylase domain-containing protein | - |
| NL411_RS20105 (3826829) | 3826829..3828217 | - | 1389 | WP_096957095.1 | phage DNA ejection protein | - |
| NL411_RS20110 (3828227) | 3828227..3828922 | - | 696 | WP_059331137.1 | hypothetical protein | - |
| NL411_RS20115 (3828925) | 3828925..3829380 | - | 456 | WP_016242489.1 | DUF2824 family protein | - |
| NL411_RS20120 (3829380) | 3829380..3830333 | - | 954 | WP_129971772.1 | tail needle knob protein | - |
| NL411_RS20125 (3830333) | 3830333..3831751 | - | 1419 | WP_255091782.1 | packaged DNA stabilization protein gp10 | - |
| NL411_RS20130 (3831751) | 3831751..3832251 | - | 501 | WP_016246152.1 | packaged DNA stabilization gp4 family protein | - |
| NL411_RS20135 (3832229) | 3832229..3832489 | - | 261 | WP_024180326.1 | hypothetical protein | - |
| NL411_RS20140 (3832534) | 3832534..3833829 | - | 1296 | WP_255091781.1 | P22 phage major capsid protein family protein | - |
| NL411_RS20145 (3833829) | 3833829..3834740 | - | 912 | WP_016231958.1 | scaffolding protein | - |
| NL411_RS20150 (3834754) | 3834754..3836919 | - | 2166 | WP_255091780.1 | portal protein | - |
| NL411_RS20155 (3836920) | 3836920..3838419 | - | 1500 | WP_255091779.1 | terminase family protein | - |
| NL411_RS20160 (3838397) | 3838397..3838885 | - | 489 | WP_000729920.1 | DNA-packaging protein | - |
| NL411_RS20165 (3838920) | 3838920..3839162 | - | 243 | WP_000807788.1 | DUF2560 family protein | - |
| NL411_RS20170 (3839516) | 3839516..3840034 | - | 519 | WP_024193020.1 | Rha family transcriptional regulator | - |
| NL411_RS20175 (3840240) | 3840240..3840677 | - | 438 | WP_251288109.1 | lysis protein | - |
| NL411_RS20180 (3840674) | 3840674..3841171 | - | 498 | WP_085455284.1 | lysozyme RrrD | - |
| NL411_RS20185 (3841171) | 3841171..3841386 | - | 216 | WP_000839574.1 | class II holin family protein | - |
| NL411_RS20190 (3841930) | 3841930..3842553 | - | 624 | WP_001235459.1 | antitermination protein | - |
| NL411_RS20195 (3842550) | 3842550..3842738 | - | 189 | WP_000994517.1 | protein ninH | - |
| NL411_RS20200 (3842735) | 3842735..3843097 | - | 363 | WP_001008200.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NL411_RS20205 (3843094) | 3843094..3843384 | - | 291 | WP_000002243.1 | DUF1364 domain-containing protein | - |
| NL411_RS20210 (3843384) | 3843384..3844106 | - | 723 | WP_255091778.1 | DNA-binding protein | - |
| NL411_RS20215 (3844099) | 3844099..3844275 | - | 177 | WP_000950973.1 | protein NinF | - |
| NL411_RS20220 (3844275) | 3844275..3844634 | - | 360 | WP_000386662.1 | DUF2591 family protein | - |
| NL411_RS20225 (3844637) | 3844637..3844813 | - | 177 | WP_001254220.1 | NinE family protein | - |
| NL411_RS20230 (3844810) | 3844810..3845337 | - | 528 | WP_255091777.1 | phage N-6-adenine-methyltransferase | - |
| NL411_RS20235 (3845334) | 3845334..3845774 | - | 441 | WP_000736904.1 | recombination protein NinB | - |
| NL411_RS20240 (3846049) | 3846049..3846318 | - | 270 | WP_001036028.1 | hypothetical protein | - |
| NL411_RS20245 (3846315) | 3846315..3847691 | - | 1377 | WP_000806596.1 | replicative DNA helicase | - |
| NL411_RS20250 (3847688) | 3847688..3848509 | - | 822 | WP_001608293.1 | replication protein | - |
| NL411_RS20255 (3848496) | 3848496..3848657 | - | 162 | WP_000166961.1 | hypothetical protein | - |
| NL411_RS20260 (3848690) | 3848690..3848986 | - | 297 | WP_000035948.1 | CII family transcriptional regulator | - |
| NL411_RS20265 (3849102) | 3849102..3849287 | - | 186 | WP_000276885.1 | Cro/CI family transcriptional regulator | - |
| NL411_RS20270 (3849368) | 3849368..3850018 | + | 651 | WP_001095982.1 | LexA family transcriptional regulator | - |
| NL411_RS20275 (3850333) | 3850333..3850638 | + | 306 | WP_024261940.1 | hypothetical protein | - |
| NL411_RS20280 (3850641) | 3850641..3850979 | + | 339 | WP_000930321.1 | hypothetical protein | - |
| NL411_RS20285 (3851013) | 3851013..3851105 | + | 93 | Protein_3652 | regulator | - |
| NL411_RS20290 (3851114) | 3851114..3851365 | + | 252 | WP_252707804.1 | hypothetical protein | - |
| NL411_RS20295 (3851470) | 3851470..3851634 | + | 165 | WP_255091776.1 | hypothetical protein | - |
| NL411_RS20300 (3851853) | 3851853..3851987 | + | 135 | WP_000972063.1 | hypothetical protein | - |
| NL411_RS20305 (3851972) | 3851972..3852124 | + | 153 | WP_001243355.1 | host cell division inhibitory peptide Kil | - |
| NL411_RS20310 (3852209) | 3852209..3852517 | + | 309 | WP_000604111.1 | hypothetical protein | - |
| NL411_RS20315 (3852514) | 3852514..3853425 | + | 912 | WP_069912923.1 | recombinase RecT | - |
| NL411_RS20320 (3853409) | 3853409..3853891 | + | 483 | WP_233328263.1 | siphovirus Gp157 family protein | - |
| NL411_RS20325 (3853903) | 3853903..3854217 | + | 315 | WP_000753555.1 | hypothetical protein | - |
| NL411_RS20330 (3854234) | 3854234..3854515 | + | 282 | WP_103856081.1 | DUF5405 family protein | - |
| NL411_RS20335 (3854512) | 3854512..3854676 | + | 165 | WP_001214456.1 | DUF2737 family protein | - |
| NL411_RS20340 (3854784) | 3854784..3854885 | + | 102 | Protein_3663 | hypothetical protein | - |
| NL411_RS20345 (3854944) | 3854944..3855165 | + | 222 | WP_001683865.1 | hypothetical protein | - |
| NL411_RS20350 (3855162) | 3855162..3855827 | + | 666 | WP_255091775.1 | hypothetical protein | - |
| NL411_RS20355 (3856629) | 3856629..3856874 | + | 246 | Protein_3666 | S24 family peptidase | - |
| NL411_RS20360 (3856907) | 3856907..3857245 | + | 339 | Protein_3667 | hypothetical protein | - |
| NL411_RS20365 (3857274) | 3857274..3857702 | + | 429 | WP_016262220.1 | DUF2513 domain-containing protein | - |
| NL411_RS20370 (3857786) | 3857786..3857953 | + | 168 | WP_000545733.1 | hypothetical protein | - |
| NL411_RS20375 (3857980) | 3857980..3858324 | + | 345 | WP_001281193.1 | hypothetical protein | - |
| NL411_RS20380 (3858415) | 3858415..3858762 | + | 348 | WP_000390730.1 | helix-turn-helix domain-containing protein | - |
| NL411_RS20385 (3858645) | 3858645..3859799 | + | 1155 | WP_244575600.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NL411_RS20395 (3860004) | 3860004..3861257 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL411_RS20400 (3861269) | 3861269..3862372 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL411_RS20410 (3863437) | 3863437..3864492 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL411_RS20415 (3864531) | 3864531..3864932 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3865650) | 3865650..3865730 | - | 81 | NuclAT_11 | - | - |
| - (3865650) | 3865650..3865730 | - | 81 | NuclAT_11 | - | - |
| - (3865650) | 3865650..3865730 | - | 81 | NuclAT_11 | - | - |
| - (3865650) | 3865650..3865730 | - | 81 | NuclAT_11 | - | - |
| NL411_RS20420 (3864990) | 3864990..3866234 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| NL411_RS20425 (3866326) | 3866326..3866784 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NL411_RS20430 (3867045) | 3867045..3868502 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| NL411_RS20435 (3868559) | 3868559..3868911 | - | 353 | Protein_3681 | peptide chain release factor H | - |
| NL411_RS20440 (3868907) | 3868907..3869113 | - | 207 | Protein_3682 | RtcB family protein | - |
| NL411_RS20445 (3869359) | 3869359..3869811 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| NL411_RS20450 (3869821) | 3869821..3870219 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| NL411_RS20455 (3870222) | 3870222..3870515 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|