MGE detailed information
MGE type: IScluster/Tn MGE length: 32745 bp
Accession: NZ_CP117003 Location: 25031..57775 Organism: Escherichia coli strain MLI108K3 Replicon: plasmid p95_MLI108-3
Accession: NZ_CP117003 Location: 25031..57775 Organism: Escherichia coli strain MLI108K3 Replicon: plasmid p95_MLI108-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL411_RS00690 (NL411_000690) | 22094..22678 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| NL411_RS00695 (NL411_000695) | 22675..23274 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| NL411_RS00700 (NL411_000700) | 23284..24210 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| NL411_RS00705 (NL411_000705) | 24279..24596 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| NL411_RS00710 (NL411_000710) | 24820..24999 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| NL411_RS00715 (NL411_000715) | 25031..25642 | - | 612 | Protein_20 | IS3 family transposase ISRaq1 | Transposase |
| NL411_RS00720 (NL411_000720) | 26389..26658 | + | 270 | WP_021546940.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NL411_RS00725 (NL411_000725) | 26658..26936 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NL411_RS00730 (NL411_000730) | 26982..27194 | + | 213 | Protein_23 | 3'-5' exonuclease | - |
| NL411_RS00735 (NL411_000735) | 27289..27525 | + | 237 | WP_223417154.1 | transposase | - |
| NL411_RS00740 (NL411_000740) | 27778..29529 | - | 1752 | Protein_25 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NL411_RS00745 (NL411_000745) | 29533..29925 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| NL411_RS00750 (NL411_000750) | 30063..30947 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| NL411_RS00755 (NL411_000755) | 30979..32178 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| NL411_RS00760 (NL411_000760) | 32284..32934 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NL411_RS00765 (NL411_000765) | 32966..33208 | - | 243 | WP_000844627.1 | transposase | - |
| NL411_RS00770 (NL411_000770) | 33266..34084 | - | 819 | Protein_31 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NL411_RS00775 (NL411_000775) | 34145..34849 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NL411_RS00780 (NL411_000780) | 34795..35907 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| NL411_RS00785 (NL411_000785) | 36063..36536 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| NL411_RS00790 (NL411_000790) | 36783..37487 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NL411_RS00795 (NL411_000795) | 37539..39305 | + | 1767 | Protein_36 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| NL411_RS00800 (NL411_000800) | 39384..40388 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| NL411_RS00805 (NL411_000805) | 40660..40746 | - | 87 | Protein_38 | Arm DNA-binding domain-containing protein | - |
| NL411_RS00810 (NL411_000810) | 41076..41891 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NL411_RS00815 (NL411_000815) | 41952..42755 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NL411_RS00820 (NL411_000820) | 42755..43591 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| NL411_RS00825 (NL411_000825) | 43698..44102 | - | 405 | Protein_42 | IS91 family transposase ISPps1 | Transposase |
| NL411_RS00830 (NL411_000830) | 44312..45172 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NL411_RS00835 (NL411_000835) | 45355..45912 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NL411_RS00840 (NL411_000840) | 46076..46294 | + | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL411_RS00845 (NL411_000845) | 46476..47738 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NL411_RS00850 (NL411_000850) | 47994..48869 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| NL411_RS00855 (NL411_000855) | 48916..49248 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| NL411_RS00860 (NL411_000860) | 49262..50020 | + | 759 | Protein_49 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL411_RS00865 (NL411_000865) | 50034..51380 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| NL411_RS00870 (NL411_000870) | 51447..53495 | + | 2049 | Protein_51 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL411_RS00875 (NL411_000875) | 53538..54553 | - | 1016 | Protein_52 | IS3 family transposase ISEc36 | Transposase |
| NL411_RS00880 (NL411_000880) | 54948..55604 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NL411_RS00885 (NL411_000885) | 55923..56351 | - | 429 | Protein_54 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NL411_RS00890 (NL411_000890) | 56384..57775 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| NL411_RS00895 (NL411_000895) | 57812..58384 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| NL411_RS00900 (NL411_000900) | 58521..59066 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| NL411_RS00905 (NL411_000905) | 59201..59362 | - | 162 | Protein_58 | type II toxin-antitoxin system mRNA interferase RelE | - |
| NL411_RS00910 (NL411_000910) | 59362..59601 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| NL411_RS00915 (NL411_000915) | 59626..59730 | + | 105 | Protein_60 | protein YdfV | - |
| NL411_RS00920 (NL411_000920) | 59982..61979 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|