MGE detailed information
MGE type: Prophage MGE length: 62977 bp
Accession: NZ_CP117001 Location: 725458..788434 Organism: Escherichia coli strain MLI108K2 Replicon: chromosome
Accession: NZ_CP117001 Location: 725458..788434 Organism: Escherichia coli strain MLI108K2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL410_RS05355 (721270) | 721270..721473 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NL410_RS05360 (721508) | 721508..722968 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| NL410_RS05365 (723057) | 723057..724424 | - | 1368 | Protein_711 | MHS family MFS transporter | - |
| NL410_RS05370 (724945) | 724945..725058 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NL410_RS05375 (725127) | 725127..725360 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NL410_RS05385 (726453) | 726453..727043 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NL410_RS05390 (727141) | 727141..727716 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| NL410_RS05395 (727716) | 727716..730790 | - | 3075 | WP_072053404.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NL410_RS05400 (730855) | 730855..731454 | - | 600 | WP_001230375.1 | Attachment invasion locus protein | VF |
| NL410_RS05405 (731524) | 731524..735021 | - | 3498 | WP_046464172.1 | host specificity protein J | - |
| NL410_RS05410 (735082) | 735082..735654 | - | 573 | WP_001557944.1 | tail assembly protein | - |
| NL410_RS05415 (735651) | 735651..736394 | - | 744 | WP_001441739.1 | C40 family peptidase | - |
| NL410_RS05420 (736399) | 736399..737097 | - | 699 | WP_001152619.1 | phage minor tail protein L | - |
| NL410_RS05425 (737097) | 737097..737426 | - | 330 | WP_000847347.1 | phage tail protein | - |
| NL410_RS05430 (737423) | 737423..739984 | - | 2562 | WP_046464171.1 | phage tail tape measure protein | - |
| NL410_RS05435 (739977) | 739977..740411 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| NL410_RS05440 (740393) | 740393..740815 | - | 423 | WP_046464170.1 | phage minor tail protein G | - |
| NL410_RS05445 (740831) | 740831..741571 | - | 741 | WP_001349920.1 | phage tail protein | - |
| NL410_RS05450 (741579) | 741579..741974 | - | 396 | WP_021526108.1 | phage minor tail U family protein | - |
| NL410_RS05455 (741971) | 741971..742549 | - | 579 | WP_046464169.1 | phage tail protein | - |
| NL410_RS05460 (742561) | 742561..742914 | - | 354 | WP_046464168.1 | head-tail joining protein | - |
| NL410_RS05465 (742926) | 742926..743321 | - | 396 | WP_000158880.1 | DNA-packaging protein FI | - |
| NL410_RS05470 (743363) | 743363..744388 | - | 1026 | WP_046464167.1 | major capsid protein | - |
| NL410_RS05475 (744444) | 744444..744776 | - | 333 | WP_046464166.1 | head decoration protein | - |
| NL410_RS05480 (744786) | 744786..746105 | - | 1320 | WP_000123305.1 | S49 family peptidase | - |
| NL410_RS05485 (746086) | 746086..747687 | - | 1602 | WP_046464165.1 | phage portal protein | - |
| NL410_RS05490 (747684) | 747684..747890 | - | 207 | WP_000198149.1 | gpW family protein | - |
| NL410_RS05495 (747887) | 747887..749812 | - | 1926 | WP_046464164.1 | phage terminase large subunit family protein | - |
| NL410_RS05500 (749787) | 749787..750332 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| NL410_RS05505 (750721) | 750721..750954 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| NL410_RS05510 (751012) | 751012..751422 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| NL410_RS05515 (751574) | 751574..751746 | - | 173 | Protein_741 | addiction module toxin, GnsA/GnsB family | - |
| NL410_RS05520 (751918) | 751918..752148 | - | 231 | WP_046464163.1 | protein YnfN | - |
| NL410_RS05525 (752153) | 752153..752218 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| NL410_RS05530 (752221) | 752221..752409 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| NL410_RS05535 (752420) | 752420..752632 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NL410_RS05540 (752995) | 752995..753492 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| NL410_RS05545 (753489) | 753489..753977 | - | 489 | WP_046464162.1 | lysozyme | - |
| NL410_RS05555 (755219) | 755219..755284 | - | 66 | Protein_749 | lysozyme | - |
| NL410_RS05560 (755281) | 755281..755592 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| NL410_RS05565 (755597) | 755597..755812 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| NL410_RS05570 (756032) | 756032..756202 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NL410_RS05575 (756566) | 756566..756781 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NL410_RS05580 (757082) | 757082..757294 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NL410_RS05585 (757349) | 757349..757438 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| NL410_RS05590 (757716) | 757716..758468 | - | 753 | WP_001047135.1 | antitermination protein | - |
| NL410_RS05595 (758482) | 758482..759531 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| NL410_RS05600 (759533) | 759533..759811 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| NL410_RS05605 (759878) | 759878..760129 | - | 252 | WP_000980994.1 | protein Rem | - |
| NL410_RS05610 (760346) | 760346..760501 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NL410_RS05615 (760573) | 760573..760860 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NL410_RS05620 (760860) | 760860..761099 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NL410_RS05625 (761124) | 761124..761429 | + | 306 | WP_001326990.1 | protein YdfV | - |
| NL410_RS05630 (761632) | 761632..761964 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| NL410_RS05635 (762401) | 762401..762550 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| NL410_RS05640 (762671) | 762671..763693 | - | 1023 | Protein_766 | ISNCY family transposase ISCARN112 | Transposase |
| NL410_RS05645 (764483) | 764483..764770 | - | 288 | Protein_767 | hypothetical protein | - |
| NL410_RS05650 (764992) | 764992..765396 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| NL410_RS05655 (765393) | 765393..765740 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| NL410_RS05660 (765789) | 765789..767328 | + | 1540 | Protein_770 | IS66 family transposase ISEc22 | Transposase |
| NL410_RS05665 (767711) | 767711..768200 | - | 490 | Protein_771 | class I SAM-dependent methyltransferase | - |
| NL410_RS05670 (768197) | 768197..768619 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| NL410_RS05675 (768660) | 768660..769625 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| NL410_RS05680 (769606) | 769606..770127 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| NL410_RS05685 (770111) | 770111..770341 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| NL410_RS05690 (770425) | 770425..770832 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| NL410_RS05695 (770999) | 770999..771154 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| NL410_RS05700 (771156) | 771156..771284 | + | 129 | WP_000344964.1 | protein YdfB | - |
| NL410_RS05705 (771314) | 771314..771532 | + | 219 | WP_001171942.1 | protein YdfC | - |
| NL410_RS05710 (772100) | 772100..772288 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NL410_RS05715 (772285) | 772285..772476 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| NL410_RS05720 (772569) | 772569..775040 | + | 2472 | WP_000048342.1 | exonuclease | - |
| NL410_RS05725 (775113) | 775113..775364 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| NL410_RS05730 (775399) | 775399..776679 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NL410_RS05735 (776867) | 776867..777886 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| NL410_RS05740 (777898) | 777898..779112 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| NL410_RS05745 (779318) | 779318..779644 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| NL410_RS05750 (779779) | 779779..780120 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| NL410_RS05755 (780155) | 780155..780715 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| NL410_RS05760 (780718) | 780718..781428 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| NL410_RS05765 (781536) | 781536..781841 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| NL410_RS05770 (782040) | 782040..784466 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NL410_RS05775 (784527) | 784527..786950 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NL410_RS05780 (786961) | 786961..787578 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| NL410_RS05785 (787580) | 787580..788434 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NL410_RS05790 (788477) | 788477..789091 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| NL410_RS05795 (789250) | 789250..790542 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NL410_RS05800 (790495) | 790495..791190 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| NL410_RS05805 (791315) | 791315..792535 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|