MGE detailed information
MGE type: Genomic_island MGE length: 17817 bp
Accession: NZ_CP116987 Location: 4130759..4148575 Organism: Escherichia coli strain MLI107 Replicon: chromosome
Accession: NZ_CP116987 Location: 4130759..4148575 Organism: Escherichia coli strain MLI107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL408_RS20090 (4127291) | 4127291..4128016 | - | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
| NL408_RS20095 (4128053) | 4128053..4128592 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| NL408_RS20100 (4128657) | 4128657..4129205 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| NL408_RS20105 (4129685) | 4129685..4130281 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| NL408_RS20110 (4130759) | 4130759..4131361 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NL408_RS20115 (4132817) | 4132817..4133533 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NL408_RS20120 (4133552) | 4133552..4134658 | + | 1107 | WP_001044128.1 | N-acetylneuraminate epimerase | - |
| NL408_RS20125 (4134723) | 4134723..4135703 | + | 981 | WP_001366032.1 | sialate O-acetylesterase | - |
| NL408_RS20130 (4135711) | 4135711..4135815 | - | 105 | Protein_3937 | HNH endonuclease | - |
| NL408_RS20135 (4135915) | 4135915..4136787 | + | 873 | WP_000168567.1 | HNH endonuclease | - |
| NL408_RS20140 (4136898) | 4136898..4137896 | - | 999 | WP_001240355.1 | membrane protein | - |
| NL408_RS20145 (4138470) | 4138470..4138841 | - | 372 | WP_001193488.1 | TA system toxin CbtA family protein | Toxin Detail |
| NL408_RS20150 (4138880) | 4138880..4139245 | - | 366 | WP_001059301.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NL408_RS20155 (4139271) | 4139271..4139492 | - | 222 | WP_000691983.1 | DUF987 domain-containing protein | - |
| NL408_RS20160 (4139489) | 4139489..4140031 | - | 543 | WP_015740440.1 | DNA repair protein RadC | - |
| NL408_RS20165 (4140044) | 4140044..4140487 | - | 444 | WP_001096016.1 | antirestriction protein | - |
| NL408_RS20170 (4140518) | 4140518..4141339 | - | 822 | WP_001234409.1 | DUF932 domain-containing protein | - |
| NL408_RS20175 (4141459) | 4141459..4141932 | - | 474 | WP_001298943.1 | hypothetical protein | - |
| NL408_RS20180 (4142004) | 4142004..4142456 | - | 453 | WP_000734321.1 | hypothetical protein | - |
| NL408_RS20185 (4142492) | 4142492..4143208 | - | 717 | WP_000174910.1 | WYL domain-containing protein | - |
| NL408_RS20190 (4143452) | 4143452..4144327 | - | 876 | WP_001039469.1 | GTPase family protein | - |
| NL408_RS20195 (4144412) | 4144412..4145296 | - | 885 | WP_000240138.1 | hypothetical protein | - |
| NL408_RS20200 (4145780) | 4145780..4145986 | + | 207 | WP_000213332.1 | AlpA family phage regulatory protein | - |
| NL408_RS20205 (4146083) | 4146083..4146676 | + | 594 | WP_000656300.1 | hypothetical protein | - |
| NL408_RS20210 (4146875) | 4146875..4147450 | + | 576 | WP_001180706.1 | inovirus-type Gp2 protein | - |
| NL408_RS20215 (4147621) | 4147621..4147913 | + | 293 | Protein_3954 | DNA polymerase III subunit alpha | - |
| NL408_RS20220 (4148213) | 4148213..4148575 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| NL408_RS20225 (4148632) | 4148632..4150887 | - | 2256 | WP_001083255.1 | protein DpdD | - |
| NL408_RS20230 (4150884) | 4150884..4151426 | - | 543 | WP_001097549.1 | phospholipase D-like domain-containing protein DpdK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|