MGE detailed information
MGE type: Prophage MGE length: 18760 bp
Accession: NZ_CP116976 Location: 3961064..3979823 Organism: Escherichia coli strain CUVM53 Replicon: chromosome
Accession: NZ_CP116976 Location: 3961064..3979823 Organism: Escherichia coli strain CUVM53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP10_RS19150 (3957062) | 3957062..3957541 | - | 480 | WP_001016605.1 | xanthine dehydrogenase iron sulfur-binding subunit XdhC | - |
| PQP10_RS19155 (3957538) | 3957538..3958416 | - | 879 | WP_000459182.1 | xanthine dehydrogenase FAD-binding subunit XdhB | - |
| PQP10_RS19160 (3958427) | 3958427..3960724 | - | 2298 | WP_000388150.1 | xanthine dehydrogenase molybdenum-binding subunit XdhA | - |
| PQP10_RS19170 (3962357) | 3962357..3963985 | - | 1629 | WP_000935083.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PQP10_RS19180 (3964272) | 3964272..3965027 | - | 756 | WP_001301085.1 | amidase activator ActS | - |
| PQP10_RS19185 (3965182) | 3965182..3965879 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| PQP10_RS19190 (3965894) | 3965894..3966826 | + | 933 | Protein_3737 | ISAs1 family transposase ISEc1 | Transposase |
| PQP10_RS19195 (3966872) | 3966872..3967240 | + | 369 | Protein_3738 | ISAs1 family transposase ISEc1 | Transposase |
| PQP10_RS19200 (3967297) | 3967297..3968067 | - | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| PQP10_RS19205 (3968248) | 3968248..3968694 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PQP10_RS19210 (3968737) | 3968737..3971181 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| PQP10_RS19215 (3971421) | 3971421..3971999 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PQP10_RS19220 (3972205) | 3972205..3972972 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| PQP10_RS19225 (3972943) | 3972943..3973683 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PQP10_RS19230 (3973839) | 3973839..3974117 | - | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PQP10_RS19235 (3974120) | 3974120..3974380 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PQP10_RS19240 (3974566) | 3974566..3975339 | + | 774 | WP_001353765.1 | hypothetical protein | VF |
| PQP10_RS19245 (3975515) | 3975515..3976012 | + | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| PQP10_RS19250 (3976228) | 3976228..3977940 | - | 1713 | Protein_3749 | Flagellar biosynthesis protein FlhA | VF |
| PQP10_RS19255 (3977912) | 3977912..3978697 | + | 786 | WP_072132640.1 | Chemotaxis protein LafU | VF |
| PQP10_RS19260 (3978768) | 3978768..3979823 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| PQP10_RS19265 (3979875) | 3979875..3980168 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | - |
| PQP10_RS19270 (3980171) | 3980171..3980569 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| PQP10_RS19275 (3980579) | 3980579..3981031 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| PQP10_RS19280 (3981277) | 3981277..3981480 | + | 204 | Protein_3755 | RtcB family protein | - |
| PQP10_RS19285 (3981479) | 3981479..3982000 | + | 522 | Protein_3756 | peptide chain release factor H | - |
| PQP10_RS19290 (3982057) | 3982057..3983514 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| PQP10_RS19295 (3983775) | 3983775..3984233 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|