MGE detailed information
MGE type: Prophage MGE length: 23446 bp
Accession: NZ_CP116976 Location: 1025179..1048624 Organism: Escherichia coli strain CUVM53 Replicon: chromosome
Accession: NZ_CP116976 Location: 1025179..1048624 Organism: Escherichia coli strain CUVM53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP10_RS05045 () | 1021035..1021835 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| PQP10_RS05050 () | 1021848..1022699 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| PQP10_RS05055 () | 1022754..1023212 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| PQP10_RS05060 () | 1023641..1024207 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| PQP10_RS05065 () | 1024204..1025013 | - | 810 | WP_000010149.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP10_RS05070 () | 1025179..1025388 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP10_RS05075 () | 1025401..1025544 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| PQP10_RS05080 () | 1026213..1026500 | - | 288 | WP_001006866.1 | YebO family protein | - |
| PQP10_RS05085 () | 1026575..1026718 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| PQP10_RS05090 () | 1026877..1027116 | + | 240 | WP_001211011.1 | YobH family protein | - |
| PQP10_RS05095 () | 1027278..1028246 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| PQP10_RS05100 () | 1028324..1029115 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP10_RS05105 () | 1029292..1030665 | + | 1374 | WP_094336971.1 | MFS transporter | - |
| PQP10_RS05110 () | 1030711..1031592 | - | 882 | WP_000984517.1 | protease HtpX | - |
| PQP10_RS05115 () | 1031784..1033832 | - | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| PQP10_RS05120 () | 1033852..1034550 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| PQP10_RS05125 () | 1034647..1035144 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| PQP10_RS05130 () | 1035274..1036557 | + | 1284 | WP_272772403.1 | membrane integrity lipid transport subunit YebS | - |
| PQP10_RS05135 () | 1036526..1039159 | + | 2634 | WP_001297532.1 | Intermembrane transport protein YebT | VF |
| PQP10_RS05140 () | 1039239..1040678 | + | 1440 | WP_001338165.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP10_RS05145 () | 1040796..1041032 | + | 237 | WP_001338166.1 | YebV family protein | - |
| PQP10_RS05150 () | 1041137..1041328 | + | 192 | WP_001338167.1 | YebW family protein | - |
| PQP10_RS05155 () | 1041329..1041977 | - | 649 | Protein_1020 | protein-serine/threonine phosphatase | - |
| PQP10_RS05160 () | 1042160..1042857 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| - | 1042873..1043122 | + | 250 | - | - | Antitoxin Detail |
| - | 1042889..1042992 | - | 104 | - | - | Toxin Detail |
| PQP10_RS05165 () | 1043150..1043491 | - | 342 | WP_000976472.1 | YebY family protein | - |
| PQP10_RS05170 () | 1043504..1044376 | - | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| PQP10_RS05175 () | 1044380..1044754 | - | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| PQP10_RS05180 () | 1044893..1045123 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| PQP10_RS05185 () | 1045225..1045881 | + | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| PQP10_RS05190 () | 1045905..1046567 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| PQP10_RS05195 () | 1046564..1048624 | - | 2061 | WP_000936920.1 | oligopeptidase B | - |
| PQP10_RS05200 () | 1048833..1049492 | - | 660 | WP_094336970.1 | tellurite resistance TerB family protein | - |
| PQP10_RS05205 () | 1049819..1050175 | - | 357 | WP_001295500.1 | protein YebF | - |
| PQP10_RS05210 () | 1050242..1050532 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| PQP10_RS05215 () | 1050666..1051844 | + | 1179 | WP_000173509.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP10_RS05220 () | 1051900..1052541 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|