MGE detailed information
MGE type: Genomic_island MGE length: 18019 bp
Accession: NZ_CP116970 Location: 4127782..4145800 Organism: Escherichia coli strain CUVM3 Replicon: chromosome
Accession: NZ_CP116970 Location: 4127782..4145800 Organism: Escherichia coli strain CUVM3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP09_RS20355 (4123079) | 4123079..4125220 | + | 2142 | WP_000103319.1 | type VI secretion system tip protein VgrG | - |
| PQP09_RS20360 (4125329) | 4125329..4125538 | + | 210 | WP_232592679.1 | DUF6531 domain-containing protein | - |
| PQP09_RS20365 (4125537) | 4125537..4126967 | + | 1431 | Protein_3963 | RHS repeat protein | - |
| PQP09_RS20370 (4126979) | 4126979..4127428 | + | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| PQP09_RS20375 (4127689) | 4127689..4128825 | + | 1137 | Protein_3965 | ISAs1 family transposase ISEc1 | Transposase |
| PQP09_RS20380 (4128855) | 4128855..4129307 | + | 453 | WP_000960005.1 | hypothetical protein | - |
| PQP09_RS20385 (4129573) | 4129573..4129767 | + | 195 | WP_000990552.1 | DUF3969 family protein | - |
| PQP09_RS20390 (4129848) | 4129848..4134020 | + | 4173 | WP_001697813.1 | Protein RhsD | VF |
| PQP09_RS20395 (4134004) | 4134004..4134486 | + | 483 | WP_000939262.1 | protein YdcD | - |
| PQP09_RS20400 (4134401) | 4134401..4134586 | - | 186 | WP_122985282.1 | hypothetical protein | - |
| PQP09_RS20405 (4134667) | 4134667..4135793 | + | 1127 | Protein_3971 | ISAs1 family transposase ISEc26 | Transposase |
| PQP09_RS20410 (4135896) | 4135896..4137032 | + | 1137 | Protein_3972 | ISAs1 family transposase ISEc1 | Transposase |
| PQP09_RS20415 (4137074) | 4137074..4137844 | - | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| PQP09_RS20420 (4138025) | 4138025..4138471 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PQP09_RS20425 (4138514) | 4138514..4140958 | - | 2445 | WP_000973094.1 | Acyl-coenzyme A dehydrogenase | VF |
| PQP09_RS20430 (4141198) | 4141198..4141776 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PQP09_RS20435 (4141982) | 4141982..4142749 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PQP09_RS20440 (4142720) | 4142720..4143460 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PQP09_RS20445 (4143616) | 4143616..4143894 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PQP09_RS20450 (4143897) | 4143897..4144157 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PQP09_RS20455 (4144343) | 4144343..4145116 | + | 774 | WP_000543895.1 | hypothetical protein | VF |
| PQP09_RS20460 (4145173) | 4145173..4145529 | - | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| PQP09_RS20465 (4145522) | 4145522..4145800 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| PQP09_RS20470 (4145905) | 4145905..4147617 | - | 1713 | Protein_3984 | flagellar biosynthesis protein FlhA | - |
| PQP09_RS20475 (4147589) | 4147589..4148374 | + | 786 | WP_000207590.1 | putative lateral flagellar export/assembly protein LafU | - |
| PQP09_RS20480 (4148445) | 4148445..4149500 | + | 1056 | WP_112918051.1 | DNA polymerase IV | - |
| PQP09_RS20485 (4149497) | 4149497..4149949 | + | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|