MGE detailed information
MGE type: Genomic_island MGE length: 52667 bp
Accession: NZ_CP116931 Location: 3808839..3861505 Organism: Escherichia coli strain MLI106K1 Replicon: chromosome
Accession: NZ_CP116931 Location: 3808839..3861505 Organism: Escherichia coli strain MLI106K1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL422_RS19010 (3804555) | 3804555..3805223 | + | 669 | WP_001550676.1 | protein YkgH | - |
| NL422_RS19015 (3805466) | 3805466..3806161 | - | 696 | WP_001550675.1 | lactate utilization protein C | - |
| NL422_RS19020 (3806154) | 3806154..3807581 | - | 1428 | WP_001550674.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NL422_RS19025 (3807592) | 3807592..3808311 | - | 720 | WP_001102122.1 | (Fe-S)-binding protein | - |
| NL422_RS19030 (3808839) | 3808839..3809693 | - | 855 | WP_000339603.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NL422_RS19035 (3809920) | 3809920..3811245 | + | 1326 | WP_072617209.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NL422_RS19040 (3811354) | 3811354..3811590 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NL422_RS19045 (3811602) | 3811602..3812195 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| NL422_RS19050 (3812355) | 3812355..3813224 | - | 870 | WP_001309281.1 | aldo/keto reductase | - |
| NL422_RS19055 (3813472) | 3813472..3814329 | + | 858 | WP_001309280.1 | Right origin-binding protein | VF |
| NL422_RS19060 (3814454) | 3814454..3818704 | - | 4251 | WP_072617208.1 | hypothetical protein | VF |
| NL422_RS19065 (3819269) | 3819269..3820120 | + | 852 | WP_001550672.1 | aldo/keto reductase | - |
| NL422_RS19070 (3820147) | 3820147..3821136 | + | 990 | WP_001172288.1 | aldo/keto reductase | - |
| NL422_RS19075 (3821167) | 3821167..3822060 | - | 894 | WP_001550671.1 | HTH-type transcriptional regulator PgrR | VF |
| NL422_RS19080 (3822260) | 3822260..3823186 | - | 927 | WP_001328123.1 | HTH-type transcriptional regulator PgrR | VF |
| NL422_RS19085 (3823343) | 3823343..3824263 | + | 921 | WP_000860030.1 | alpha/beta hydrolase | - |
| NL422_RS19090 (3824437) | 3824437..3825579 | + | 1143 | WP_001595351.1 | NADH-dependent flavin oxidoreductase | - |
| NL422_RS19095 (3826051) | 3826051..3826152 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| NL422_RS19100 (3826511) | 3826511..3826774 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NL422_RS19105 (3826774) | 3826774..3826914 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NL422_RS19110 (3826949) | 3826949..3827174 | - | 226 | Protein_3610 | protein YkgL | - |
| NL422_RS19115 (3827998) | 3827998..3828540 | + | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| NL422_RS19120 (3828615) | 3828615..3829202 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NL422_RS19125 (3829259) | 3829259..3829927 | + | 669 | WP_001521922.1 | putative fimbrial chaperone EcpB | VF |
| NL422_RS19130 (3829953) | 3829953..3832478 | + | 2526 | WP_001131068.1 | putative outer membrane usher protein EcpC | VF |
| NL422_RS19135 (3832468) | 3832468..3834111 | + | 1644 | WP_072617207.1 | Fimbria adhesin EcpD | VF |
| NL422_RS19140 (3834080) | 3834080..3834790 | + | 711 | WP_001586708.1 | putative fimbrial chaperone EcpE | VF |
| NL422_RS19145 (3835103) | 3835103..3835432 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| NL422_RS19150 (3835681) | 3835681..3836295 | - | 615 | WP_001019920.1 | YagU family protein | - |
| NL422_RS19155 (3836701) | 3836701..3837390 | + | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| NL422_RS19160 (3837387) | 3837387..3840134 | + | 2748 | WP_072617206.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| NL422_RS19165 (3840144) | 3840144..3841097 | + | 954 | WP_001550665.1 | molybdenum cofactor insertion chaperone PaoD | - |
| NL422_RS19170 (3841276) | 3841276..3842403 | - | 1128 | WP_001550663.1 | MFS transporter | - |
| NL422_RS19175 (3842545) | 3842545..3843603 | - | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| NL422_RS19180 (3843868) | 3843868..3844752 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| NL422_RS19185 (3845186) | 3845186..3846106 | - | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NL422_RS19190 (3846093) | 3846093..3846875 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NL422_RS19195 (3847191) | 3847191..3850400 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| NL422_RS19200 (3850747) | 3850747..3851217 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| NL422_RS19205 (3851214) | 3851214..3851316 | + | 103 | Protein_3629 | helix-turn-helix domain-containing protein | - |
| NL422_RS19210 (3851408) | 3851408..3851566 | + | 159 | Protein_3630 | integrase | - |
| NL422_RS19220 (3851771) | 3851771..3853024 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL422_RS19225 (3853036) | 3853036..3854139 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL422_RS19230 (3854427) | 3854427..3855482 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL422_RS19235 (3855521) | 3855521..3855922 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3856640) | 3856640..3856720 | - | 81 | NuclAT_11 | - | - |
| - (3856640) | 3856640..3856720 | - | 81 | NuclAT_11 | - | - |
| - (3856640) | 3856640..3856720 | - | 81 | NuclAT_11 | - | - |
| - (3856640) | 3856640..3856720 | - | 81 | NuclAT_11 | - | - |
| NL422_RS19240 (3855980) | 3855980..3857224 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| NL422_RS19245 (3857316) | 3857316..3857774 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NL422_RS19250 (3858035) | 3858035..3859492 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| NL422_RS19255 (3859549) | 3859549..3859901 | - | 353 | Protein_3638 | peptide chain release factor H | - |
| NL422_RS19260 (3859897) | 3859897..3860103 | - | 207 | Protein_3639 | RtcB family protein | - |
| NL422_RS19265 (3860349) | 3860349..3860801 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| NL422_RS19270 (3860811) | 3860811..3861209 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL422_RS19275 (3861212) | 3861212..3861505 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL422_RS19280 (3861557) | 3861557..3862612 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| NL422_RS19285 (3862683) | 3862683..3863468 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| NL422_RS19290 (3863440) | 3863440..3865152 | + | 1713 | Protein_3645 | flagellar biosynthesis protein FlhA | - |
| NL422_RS19295 (3865257) | 3865257..3865535 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| NL422_RS19300 (3865528) | 3865528..3865884 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|