MGE detailed information
MGE type: Prophage MGE length: 44664 bp
Accession: NZ_CP116923 Location: 3667876..3712539 Organism: Escherichia coli strain MLI104K1 Replicon: chromosome
Accession: NZ_CP116923 Location: 3667876..3712539 Organism: Escherichia coli strain MLI104K1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL419_RS18600 (3663558) | 3663558..3664421 | + | 864 | WP_032200809.1 | GTPase family protein | - |
| NL419_RS18605 (3664513) | 3664513..3665334 | + | 822 | WP_032200808.1 | DUF932 domain-containing protein | - |
| NL419_RS18610 (3665551) | 3665551..3666252 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| NL419_RS18615 (3666293) | 3666293..3666529 | + | 237 | WP_001144031.1 | protein YpjK | - |
| NL419_RS18620 (3666529) | 3666529..3666972 | + | 444 | WP_032199444.1 | lipoprotein YafY | - |
| NL419_RS18625 (3666995) | 3666995..3667462 | + | 468 | WP_032200803.1 | protein YkfB | - |
| NL419_RS18630 (3667539) | 3667539..3667778 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| NL419_RS18635 (3667876) | 3667876..3668334 | + | 459 | WP_032177818.1 | antirestriction protein | - |
| NL419_RS18640 (3668350) | 3668350..3668826 | + | 477 | WP_072667534.1 | RadC family protein | - |
| NL419_RS18645 (3668835) | 3668835..3669056 | + | 222 | WP_063928002.1 | DUF987 domain-containing protein | - |
| NL419_RS18650 (3669075) | 3669075..3669392 | + | 318 | WP_097463457.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NL419_RS18655 (3669413) | 3669413..3669754 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| NL419_RS18660 (3670417) | 3670417..3670629 | + | 213 | Protein_3560 | IS3 family transposase ISEc48 | Transposase |
| NL419_RS18665 (3670671) | 3670671..3671414 | - | 744 | WP_032170462.1 | AraC family transcriptional regulator | - |
| NL419_RS18675 (3672675) | 3672675..3672962 | - | 288 | Protein_3563 | hypothetical protein | - |
| NL419_RS18680 (3673124) | 3673124..3673180 | + | 57 | WP_211180520.1 | protein YsgD | - |
| NL419_RS18685 (3673332) | 3673332..3674282 | + | 951 | WP_000947148.1 | magnesium/cobalt transporter CorA | - |
| NL419_RS18690 (3674436) | 3674436..3675133 | + | 698 | WP_248785138.1 | IS1 family transposase IS1R | Transposase |
| NL419_RS18695 (3675302) | 3675302..3676075 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| NL419_RS18700 (3676136) | 3676136..3676691 | - | 556 | Protein_3568 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NL419_RS18705 (3676721) | 3676721..3677116 | + | 396 | WP_255055834.1 | hypothetical protein | - |
| NL419_RS18710 (3677116) | 3677116..3677562 | + | 447 | WP_255055835.1 | tail fiber assembly protein | - |
| NL419_RS18715 (3677534) | 3677534..3678127 | - | 594 | WP_255055832.1 | tail fiber assembly protein | - |
| NL419_RS18720 (3678127) | 3678127..3678882 | - | 756 | WP_255055833.1 | phage tail protein | - |
| NL419_RS18725 (3678886) | 3678886..3679470 | - | 585 | WP_074516673.1 | YmfQ family protein | - |
| NL419_RS18730 (3679461) | 3679461..3680519 | - | 1059 | WP_021527505.1 | baseplate J/gp47 family protein | - |
| NL419_RS18735 (3680506) | 3680506..3680931 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| NL419_RS18740 (3680931) | 3680931..3681479 | - | 549 | WP_069896014.1 | phage baseplate assembly protein V | - |
| NL419_RS18745 (3681479) | 3681479..3682558 | - | 1080 | WP_000999503.1 | baseplate protein | - |
| NL419_RS18750 (3682555) | 3682555..3683883 | - | 1329 | WP_255055838.1 | DNA circularization N-terminal domain-containing protein | - |
| NL419_RS18755 (3683945) | 3683945..3684475 | - | 531 | WP_000679481.1 | hypothetical protein | - |
| NL419_RS18760 (3684567) | 3684567..3686399 | - | 1833 | WP_029396355.1 | phage tail tape measure protein | - |
| NL419_RS18765 (3686541) | 3686541..3686810 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| NL419_RS18770 (3686810) | 3686810..3687166 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| NL419_RS18775 (3687166) | 3687166..3688662 | - | 1497 | WP_077557157.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NL419_RS18780 (3688646) | 3688646..3688816 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| NL419_RS18785 (3688825) | 3688825..3689385 | - | 561 | WP_000779294.1 | hypothetical protein | - |
| NL419_RS18790 (3689382) | 3689382..3689888 | - | 507 | WP_047664126.1 | hypothetical protein | - |
| NL419_RS18795 (3689863) | 3689863..3690273 | - | 411 | WP_032224590.1 | phage head closure protein | - |
| NL419_RS18800 (3690270) | 3690270..3690593 | - | 324 | WP_000927719.1 | head-tail connector protein | - |
| NL419_RS18805 (3690596) | 3690596..3690796 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| NL419_RS18810 (3690846) | 3690846..3692051 | - | 1206 | WP_021576801.1 | phage major capsid protein | - |
| NL419_RS18815 (3692066) | 3692066..3692716 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| NL419_RS18820 (3692694) | 3692694..3693935 | - | 1242 | WP_001560816.1 | phage portal protein | - |
| NL419_RS18825 (3693935) | 3693935..3694117 | - | 183 | WP_000605606.1 | protein YmfR | - |
| NL419_RS18830 (3694129) | 3694129..3695862 | - | 1734 | WP_096846477.1 | terminase large subunit | - |
| NL419_RS18835 (3695859) | 3695859..3696353 | - | 495 | WP_021563579.1 | phage terminase small subunit P27 family | - |
| NL419_RS18840 (3696479) | 3696479..3696829 | - | 351 | WP_072672167.1 | HNH endonuclease signature motif containing protein | - |
| NL419_RS18845 (3696869) | 3696869..3697120 | + | 252 | WP_021530159.1 | hypothetical protein | - |
| NL419_RS18850 (3697315) | 3697315..3697590 | - | 276 | WP_141010255.1 | peptidase | - |
| NL419_RS18855 (3697475) | 3697475..3697867 | - | 393 | WP_072672165.1 | DUF2570 domain-containing protein | - |
| NL419_RS18860 (3697851) | 3697851..3698327 | - | 477 | WP_072672163.1 | glycoside hydrolase family protein | - |
| NL419_RS18865 (3698331) | 3698331..3698666 | - | 336 | WP_027661774.1 | phage holin, lambda family | - |
| NL419_RS18870 (3698744) | 3698744..3699796 | - | 1053 | WP_072672161.1 | site-specific DNA-methyltransferase | - |
| NL419_RS18875 (3699946) | 3699946..3700140 | - | 195 | WP_032217105.1 | hypothetical protein | - |
| NL419_RS18880 (3700442) | 3700442..3701377 | + | 936 | WP_047653678.1 | hypothetical protein | - |
| NL419_RS18885 (3701410) | 3701410..3701979 | + | 570 | WP_198406512.1 | hypothetical protein | - |
| NL419_RS18890 (3701999) | 3701999..3702346 | - | 348 | WP_047653676.1 | antiterminator Q family protein | - |
| NL419_RS18895 (3702364) | 3702364..3703353 | - | 990 | WP_072672159.1 | DUF968 domain-containing protein | - |
| NL419_RS18900 (3703361) | 3703361..3704158 | - | 798 | WP_072672157.1 | KilA-N domain-containing protein | - |
| NL419_RS18905 (3704178) | 3704178..3704567 | - | 390 | WP_072672155.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NL419_RS18910 (3704564) | 3704564..3704890 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| NL419_RS18915 (3704890) | 3704890..3705375 | - | 486 | WP_072672153.1 | PerC family transcriptional regulator | - |
| NL419_RS18920 (3705372) | 3705372..3706190 | - | 819 | WP_072672151.1 | helix-turn-helix domain-containing protein | - |
| NL419_RS18925 (3706187) | 3706187..3706423 | - | 237 | WP_000933944.1 | hypothetical protein | - |
| NL419_RS18930 (3706416) | 3706416..3706994 | - | 579 | WP_230743183.1 | ash family protein | - |
| NL419_RS18935 (3706924) | 3706924..3707103 | - | 180 | WP_230743185.1 | DUF4222 domain-containing protein | - |
| NL419_RS18940 (3707249) | 3707249..3707800 | - | 552 | WP_072672146.1 | protein YmfL | - |
| NL419_RS18945 (3707844) | 3707844..3708044 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| NL419_RS18950 (3708135) | 3708135..3708809 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| NL419_RS18955 (3709003) | 3709003..3709278 | + | 276 | WP_021563905.1 | hypothetical protein | - |
| NL419_RS18960 (3709554) | 3709554..3709873 | + | 320 | Protein_3620 | hypothetical protein | - |
| NL419_RS18965 (3709955) | 3709955..3710491 | + | 537 | WP_000008235.1 | 5'-deoxynucleotidase | - |
| NL419_RS18970 (3710482) | 3710482..3710844 | + | 363 | WP_032301943.1 | phage protein | - |
| NL419_RS18975 (3710844) | 3710844..3711149 | + | 306 | WP_000627693.1 | protein YfdT | - |
| NL419_RS18980 (3711149) | 3711149..3711499 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| NL419_RS18985 (3711421) | 3711421..3712539 | + | 1119 | WP_226235061.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| NL419_RS18995 (3712744) | 3712744..3713997 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL419_RS19000 (3714009) | 3714009..3715112 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL419_RS19005 (3715400) | 3715400..3716455 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| NL419_RS19010 (3716494) | 3716494..3716895 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|