MGE detailed information
MGE type: Genomic_island MGE length: 42585 bp
Accession: NZ_CP116916 Location: 3556795..3599379 Organism: Escherichia coli strain MLI023K2 Replicon: chromosome
Accession: NZ_CP116916 Location: 3556795..3599379 Organism: Escherichia coli strain MLI023K2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL417_RS18155 (3552512) | 3552512..3553180 | + | 669 | WP_001209100.1 | protein YkgH | - |
| NL417_RS18160 (3553423) | 3553423..3554118 | - | 696 | WP_000370307.1 | LUD domain-containing protein | - |
| NL417_RS18165 (3554111) | 3554111..3555538 | - | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NL417_RS18170 (3555549) | 3555549..3556268 | - | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| NL417_RS18175 (3556795) | 3556795..3557649 | - | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NL417_RS18180 (3557875) | 3557875..3559200 | + | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NL417_RS18185 (3559309) | 3559309..3559545 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NL417_RS18190 (3559557) | 3559557..3560150 | + | 594 | WP_187770314.1 | reactive chlorine species resistance protein RclC | - |
| NL417_RS18195 (3560309) | 3560309..3560437 | - | 129 | Protein_3413 | aldo/keto reductase | - |
| NL417_RS18200 (3560740) | 3560740..3561591 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| NL417_RS18205 (3561731) | 3561731..3565987 | - | 4257 | WP_001404662.1 | hypothetical protein | VF |
| NL417_RS18210 (3566539) | 3566539..3566628 | + | 90 | Protein_3416 | hypothetical protein | - |
| NL417_RS18215 (3567103) | 3567103..3567204 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| NL417_RS18220 (3567568) | 3567568..3567831 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NL417_RS18225 (3567831) | 3567831..3567971 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NL417_RS18230 (3568006) | 3568006..3568233 | - | 228 | WP_001147279.1 | protein YkgL | - |
| NL417_RS18235 (3569057) | 3569057..3569599 | + | 543 | WP_001323479.1 | HTH-type transcriptional regulator EcpR | VF |
| NL417_RS18240 (3569674) | 3569674..3570261 | + | 588 | WP_000730974.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NL417_RS18245 (3570319) | 3570319..3570987 | + | 669 | WP_001399951.1 | putative fimbrial chaperone EcpB | VF |
| NL417_RS18250 (3571013) | 3571013..3573538 | + | 2526 | WP_255055229.1 | putative outer membrane usher protein EcpC | VF |
| NL417_RS18255 (3573528) | 3573528..3575171 | + | 1644 | Protein_3425 | Fimbria adhesin EcpD | VF |
| NL417_RS18260 (3575140) | 3575140..3575850 | + | 711 | WP_001305432.1 | putative fimbrial chaperone EcpE | VF |
| NL417_RS18265 (3576163) | 3576163..3576492 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| NL417_RS18270 (3576740) | 3576740..3577282 | - | 543 | Protein_3428 | DUF1440 domain-containing protein | - |
| NL417_RS18280 (3578030) | 3578030..3578575 | - | 546 | WP_241372666.1 | hypothetical protein | - |
| NL417_RS18285 (3578623) | 3578623..3580464 | - | 1842 | WP_126508445.1 | hypothetical protein | - |
| NL417_RS18290 (3580499) | 3580499..3580696 | - | 198 | WP_001531083.1 | hypothetical protein | - |
| NL417_RS18295 (3580854) | 3580854..3581882 | - | 1029 | WP_241372620.1 | major capsid protein | - |
| NL417_RS18300 (3581899) | 3581899..3582273 | - | 375 | WP_000996198.1 | hypothetical protein | - |
| NL417_RS18305 (3582273) | 3582273..3582482 | - | 210 | WP_000806869.1 | hypothetical protein | - |
| NL417_RS18310 (3583474) | 3583474..3583782 | - | 309 | WP_000390658.1 | hypothetical protein | - |
| NL417_RS18315 (3583782) | 3583782..3583985 | - | 204 | WP_187770274.1 | ABC transporter ATPase | - |
| NL417_RS18320 (3584003) | 3584003..3584389 | - | 387 | WP_061301310.1 | hypothetical protein | - |
| NL417_RS18325 (3584486) | 3584486..3584755 | - | 270 | WP_187770275.1 | hypothetical protein | - |
| NL417_RS18330 (3584765) | 3584765..3585445 | - | 681 | WP_001581994.1 | hypothetical protein | - |
| NL417_RS18335 (3585499) | 3585499..3585666 | - | 168 | WP_000005054.1 | hypothetical protein | - |
| NL417_RS18340 (3585688) | 3585688..3585870 | - | 183 | WP_000873435.1 | hypothetical protein | - |
| NL417_RS18345 (3587410) | 3587410..3587961 | + | 552 | WP_001273869.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NL417_RS18350 (3588302) | 3588302..3588460 | + | 159 | WP_000550450.1 | hypothetical protein | - |
| NL417_RS18355 (3588527) | 3588527..3588679 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| NL417_RS18365 (3589476) | 3589476..3590729 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL417_RS18370 (3590741) | 3590741..3591844 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL417_RS18375 (3592132) | 3592132..3593187 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL417_RS18380 (3593226) | 3593226..3593627 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3594345) | 3594345..3594425 | - | 81 | NuclAT_11 | - | - |
| - (3594345) | 3594345..3594425 | - | 81 | NuclAT_11 | - | - |
| - (3594345) | 3594345..3594425 | - | 81 | NuclAT_11 | - | - |
| - (3594345) | 3594345..3594425 | - | 81 | NuclAT_11 | - | - |
| NL417_RS18385 (3593685) | 3593685..3594929 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| NL417_RS18390 (3595021) | 3595021..3595479 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NL417_RS18395 (3595740) | 3595740..3597197 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| NL417_RS18400 (3597254) | 3597254..3597775 | - | 522 | Protein_3453 | peptide chain release factor H | - |
| NL417_RS18405 (3597774) | 3597774..3597977 | - | 204 | Protein_3454 | RtcB family protein | - |
| NL417_RS18410 (3598223) | 3598223..3598675 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| NL417_RS18415 (3598685) | 3598685..3599083 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL417_RS18420 (3599086) | 3599086..3599379 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL417_RS18425 (3599431) | 3599431..3600486 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NL417_RS18430 (3600557) | 3600557..3601480 | - | 924 | WP_087899588.1 | putative lateral flagellar export/assembly protein LafU | - |
| NL417_RS18435 (3601483) | 3601483..3602346 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| NL417_RS18440 (3602359) | 3602359..3603075 | - | 717 | WP_000938730.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| NL417_RS18445 (3603095) | 3603095..3603562 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|