MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89725 bp
Accession: NZ_CP116914 Location: 1..89725 Organism: Escherichia coli strain MLI023K2 Replicon: plasmid p89_MLI23-2
Accession: NZ_CP116914 Location: 1..89725 Organism: Escherichia coli strain MLI023K2 Replicon: plasmid p89_MLI23-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL417_RS00005 (NL417_000005) | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| NL417_RS00010 (NL417_000010) | 1823..2146 | - | 324 | Protein_1 | lipocalin family protein | - |
| NL417_RS00015 (NL417_000015) | 2264..2989 | + | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| NL417_RS00020 (NL417_000020) | 3089..3499 | + | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| NL417_RS00025 (NL417_000025) | 3602..4561 | + | 960 | WP_000208728.1 | DUF523 and DUF1722 domain-containing protein | - |
| NL417_RS00030 (NL417_000030) | 4707..5795 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| NL417_RS00035 (NL417_000035) | 5858..6562 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| NL417_RS00040 (NL417_000040) | 6553..7041 | + | 489 | WP_072075272.1 | replication initiation protein | - |
| NL417_RS00045 (NL417_000045) | 8998..9567 | - | 570 | WP_001749988.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NL417_RS00050 (NL417_000050) | 9960..10973 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NL417_RS00055 (NL417_000055) | 11129..11602 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| NL417_RS00060 (NL417_000060) | 11849..12553 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NL417_RS00065 (NL417_000065) | 12605..14371 | + | 1767 | Protein_12 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| NL417_RS00070 (NL417_000070) | 14450..15454 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| NL417_RS00075 (NL417_000075) | 16120..16242 | + | 123 | Protein_14 | serine/threonine protein kinase | - |
| NL417_RS00080 (NL417_000080) | 16363..17103 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| NL417_RS00085 (NL417_000085) | 17382..18359 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| NL417_RS00090 (NL417_000090) | 19116..20088 | + | 973 | Protein_17 | hypothetical protein | - |
| NL417_RS00095 (NL417_000095) | 20247..20603 | - | 357 | WP_225568154.1 | abortive infection family protein | - |
| NL417_RS00100 (NL417_000100) | 20683..21380 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| NL417_RS00105 (NL417_000105) | 21397..21744 | + | 348 | Protein_20 | ABC transporter permease subunit | - |
| NL417_RS00110 (NL417_000110) | 21756..22802 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| NL417_RS00115 (NL417_000115) | 22911..23843 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| NL417_RS00120 (NL417_000120) | 23830..25233 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| NL417_RS00125 (NL417_000125) | 25477..26457 | + | 981 | Protein_24 | IS5 family transposase IS5D | Transposase |
| NL417_RS00130 (NL417_000130) | 26667..27002 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| NL417_RS00135 (NL417_000135) | 26952..27365 | - | 414 | Protein_26 | IS3 family transposase ISLad1 | Transposase |
| NL417_RS00140 (NL417_000140) | 27370..27648 | - | 279 | Protein_27 | pdcB | - |
| NL417_RS00145 (NL417_000145) | 27676..27855 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| NL417_RS00150 (NL417_000150) | 27860..28240 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NL417_RS00155 (NL417_000155) | 28240..28461 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL417_RS00160 (NL417_000160) | 28724..29421 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| NL417_RS00165 (NL417_000165) | 29608..29901 | - | 294 | WP_226438991.1 | biofilm development regulator YmgB/AriR family protein | - |
| NL417_RS00170 (NL417_000170) | 30205..30309 | - | 105 | Protein_33 | IS3 family transposase | - |
| NL417_RS00175 (NL417_000175) | 30336..30485 | - | 150 | Protein_34 | IS3 family transposase | - |
| NL417_RS00185 (NL417_000185) | 31699..32313 | + | 615 | WP_032214276.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| NL417_RS00190 (NL417_000190) | 32318..35911 | + | 3594 | WP_053921595.1 | acid-sensing system histidine kinase EvgS | - |
| NL417_RS00195 (NL417_000195) | 36027..36334 | + | 308 | Protein_38 | IS1-like element transposase | - |
| NL417_RS00200 (NL417_000200) | 36473..37018 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| NL417_RS00205 (NL417_000205) | 37155..37727 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| NL417_RS00210 (NL417_000210) | 37764..39155 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| NL417_RS00215 (NL417_000215) | 39188..39616 | + | 429 | Protein_42 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NL417_RS00220 (NL417_000220) | 39935..40591 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NL417_RS00225 (NL417_000225) | 40986..42001 | + | 1016 | Protein_44 | IS3 family transposase ISEc36 | Transposase |
| NL417_RS00230 (NL417_000230) | 42044..44827 | - | 2784 | Protein_45 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL417_RS00235 (NL417_000235) | 44853..45185 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| NL417_RS00240 (NL417_000240) | 45232..46107 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| NL417_RS00245 (NL417_000245) | 46363..47624 | - | 1262 | Protein_48 | IS1380 family transposase ISEcp1 | Transposase |
| NL417_RS00250 (NL417_000250) | 47806..48024 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL417_RS00255 (NL417_000255) | 48188..48745 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NL417_RS00260 (NL417_000260) | 48928..49788 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NL417_RS00265 (NL417_000265) | 49929..50909 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| NL417_RS00270 (NL417_000270) | 51611..52264 | + | 654 | Protein_53 | EamA family transporter | - |
| NL417_RS00275 (NL417_000275) | 52296..53495 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| NL417_RS00280 (NL417_000280) | 53601..54251 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NL417_RS00285 (NL417_000285) | 54283..54525 | - | 243 | WP_024203663.1 | hypothetical protein | - |
| NL417_RS00290 (NL417_000290) | 54974..55378 | + | 405 | Protein_57 | IS91 family transposase ISPps1 | Transposase |
| NL417_RS00295 (NL417_000295) | 55485..56321 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| NL417_RS00300 (NL417_000300) | 56321..57124 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NL417_RS00305 (NL417_000305) | 57185..58000 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NL417_RS00310 (NL417_000310) | 58330..58416 | + | 87 | Protein_61 | Arm DNA-binding domain-containing protein | - |
| NL417_RS00315 (NL417_000315) | 58688..59692 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| NL417_RS00320 (NL417_000320) | 59792..60078 | - | 287 | Protein_63 | Tn3 family transposase | - |
| NL417_RS00325 (NL417_000325) | 60132..60329 | - | 198 | WP_024262939.1 | alpha/beta hydrolase | - |
| NL417_RS00330 (NL417_000330) | 60407..61381 | + | 975 | WP_072164305.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NL417_RS00335 (NL417_000335) | 61567..62340 | - | 774 | WP_001091225.1 | SDR family oxidoreductase | - |
| NL417_RS00340 (NL417_000340) | 62406..63107 | - | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| NL417_RS00345 (NL417_000345) | 63173..64279 | - | 1107 | WP_006687059.1 | alkene reductase | - |
| NL417_RS00350 (NL417_000350) | 64493..64738 | + | 246 | WP_225568153.1 | thioredoxin family protein | - |
| NL417_RS00355 (NL417_000355) | 64853..65191 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| NL417_RS00360 (NL417_000360) | 65196..65777 | - | 582 | WP_000210408.1 | HTH-type transcriptional repressor NemR | VF |
| NL417_RS00365 (NL417_000365) | 65919..66476 | - | 558 | WP_053921594.1 | OsmC family protein | - |
| NL417_RS00370 (NL417_000370) | 66667..66861 | - | 195 | Protein_73 | helix-turn-helix domain-containing protein | - |
| NL417_RS00375 (NL417_000375) | 67128..68132 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| NL417_RS00380 (NL417_000380) | 68331..69158 | - | 828 | WP_053921598.1 | universal stress protein | - |
| NL417_RS00385 (NL417_000385) | 69177..70655 | - | 1479 | WP_000927305.1 | SulP family inorganic anion transporter | - |
| NL417_RS00390 (NL417_000390) | 71044..71628 | - | 585 | WP_053921599.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| NL417_RS00395 (NL417_000395) | 71788..72147 | + | 360 | Protein_78 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| NL417_RS00400 (NL417_000400) | 72199..72896 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| NL417_RS00405 (NL417_000405) | 72920..74197 | - | 1278 | WP_053921605.1 | DUF2254 domain-containing protein | - |
| NL417_RS00410 (NL417_000410) | 74260..76257 | - | 1998 | WP_032213821.1 | choline BCCT transporter BetT | - |
| NL417_RS00415 (NL417_000415) | 76409..76901 | - | 493 | Protein_82 | IS1 family transposase IS1X2 | Transposase |
| NL417_RS00420 (NL417_000420) | 76993..78570 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| NL417_RS00425 (NL417_000425) | 78880..79440 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NL417_RS00430 (NL417_000430) | 79444..82410 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NL417_RS00435 (NL417_000435) | 82756..83733 | - | 978 | WP_187770472.1 | IS91 family transposase ISWz1 | Transposase |
| NL417_RS00440 (NL417_000440) | 83925..84282 | + | 358 | Protein_87 | IS1 family transposase | - |
| NL417_RS00445 (NL417_000445) | 84571..85125 | + | 555 | Protein_88 | DUF4113 domain-containing protein | - |
| NL417_RS00450 (NL417_000450) | 85204..85455 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| NL417_RS00455 (NL417_000455) | 85509..85814 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| NL417_RS00460 (NL417_000460) | 86848..87819 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NL417_RS00465 (NL417_000465) | 87819..88985 | - | 1167 | WP_000523812.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|