MGE detailed information
MGE type: Genomic_island MGE length: 42585 bp
Accession: NZ_CP116913 Location: 3556016..3598600 Organism: Escherichia coli strain MLI023K1 Replicon: chromosome
Accession: NZ_CP116913 Location: 3556016..3598600 Organism: Escherichia coli strain MLI023K1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL406_RS18140 (3551733) | 3551733..3552401 | + | 669 | WP_001209100.1 | protein YkgH | - |
| NL406_RS18145 (3552644) | 3552644..3553339 | - | 696 | WP_000370307.1 | LUD domain-containing protein | - |
| NL406_RS18150 (3553332) | 3553332..3554759 | - | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| NL406_RS18155 (3554770) | 3554770..3555489 | - | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| NL406_RS18160 (3556016) | 3556016..3556870 | - | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| NL406_RS18165 (3557096) | 3557096..3558421 | + | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| NL406_RS18170 (3558530) | 3558530..3558766 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| NL406_RS18175 (3558778) | 3558778..3559371 | + | 594 | WP_187770314.1 | reactive chlorine species resistance protein RclC | - |
| NL406_RS18180 (3559530) | 3559530..3559658 | - | 129 | Protein_3410 | aldo/keto reductase | - |
| NL406_RS18185 (3559961) | 3559961..3560812 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| NL406_RS18190 (3560952) | 3560952..3565208 | - | 4257 | WP_001404662.1 | hypothetical protein | VF |
| NL406_RS18195 (3565760) | 3565760..3565849 | + | 90 | Protein_3413 | hypothetical protein | - |
| NL406_RS18200 (3566324) | 3566324..3566425 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| NL406_RS18205 (3566789) | 3566789..3567052 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| NL406_RS18210 (3567052) | 3567052..3567192 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| NL406_RS18215 (3567227) | 3567227..3567454 | - | 228 | WP_001147279.1 | protein YkgL | - |
| NL406_RS18220 (3568278) | 3568278..3568820 | + | 543 | WP_001323479.1 | HTH-type transcriptional regulator EcpR | VF |
| NL406_RS18225 (3568895) | 3568895..3569482 | + | 588 | WP_000730974.1 | Common pilus major fimbrillin subunit EcpA | VF |
| NL406_RS18230 (3569540) | 3569540..3570208 | + | 669 | WP_001399951.1 | putative fimbrial chaperone EcpB | VF |
| NL406_RS18235 (3570234) | 3570234..3572759 | + | 2526 | WP_255055229.1 | putative outer membrane usher protein EcpC | VF |
| NL406_RS18240 (3572749) | 3572749..3574392 | + | 1644 | Protein_3422 | Fimbria adhesin EcpD | VF |
| NL406_RS18245 (3574361) | 3574361..3575071 | + | 711 | WP_001305432.1 | putative fimbrial chaperone EcpE | VF |
| NL406_RS18250 (3575384) | 3575384..3575713 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| NL406_RS18255 (3575961) | 3575961..3576503 | - | 543 | Protein_3425 | DUF1440 domain-containing protein | - |
| NL406_RS18265 (3577251) | 3577251..3577796 | - | 546 | WP_241372666.1 | hypothetical protein | - |
| NL406_RS18270 (3577844) | 3577844..3579685 | - | 1842 | WP_126508445.1 | hypothetical protein | - |
| NL406_RS18275 (3579720) | 3579720..3579917 | - | 198 | WP_001531083.1 | hypothetical protein | - |
| NL406_RS18280 (3580075) | 3580075..3581103 | - | 1029 | WP_241372620.1 | major capsid protein | - |
| NL406_RS18285 (3581120) | 3581120..3581494 | - | 375 | WP_000996198.1 | hypothetical protein | - |
| NL406_RS18290 (3581494) | 3581494..3581703 | - | 210 | WP_000806869.1 | hypothetical protein | - |
| NL406_RS18295 (3582695) | 3582695..3583003 | - | 309 | WP_000390658.1 | hypothetical protein | - |
| NL406_RS18300 (3583003) | 3583003..3583206 | - | 204 | WP_187770274.1 | ABC transporter ATPase | - |
| NL406_RS18305 (3583224) | 3583224..3583610 | - | 387 | WP_061301310.1 | hypothetical protein | - |
| NL406_RS18310 (3583707) | 3583707..3583976 | - | 270 | WP_187770275.1 | hypothetical protein | - |
| NL406_RS18315 (3583986) | 3583986..3584666 | - | 681 | WP_001581994.1 | hypothetical protein | - |
| NL406_RS18320 (3584720) | 3584720..3584887 | - | 168 | WP_000005054.1 | hypothetical protein | - |
| NL406_RS18325 (3584909) | 3584909..3585091 | - | 183 | WP_000873435.1 | hypothetical protein | - |
| NL406_RS18330 (3586631) | 3586631..3587182 | + | 552 | WP_001273869.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NL406_RS18335 (3587523) | 3587523..3587681 | + | 159 | WP_000550450.1 | hypothetical protein | - |
| NL406_RS18340 (3587748) | 3587748..3587900 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| NL406_RS18350 (3588697) | 3588697..3589950 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NL406_RS18355 (3589962) | 3589962..3591065 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NL406_RS18360 (3591353) | 3591353..3592408 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| NL406_RS18365 (3592447) | 3592447..3592848 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3593566) | 3593566..3593646 | - | 81 | NuclAT_11 | - | - |
| - (3593566) | 3593566..3593646 | - | 81 | NuclAT_11 | - | - |
| - (3593566) | 3593566..3593646 | - | 81 | NuclAT_11 | - | - |
| - (3593566) | 3593566..3593646 | - | 81 | NuclAT_11 | - | - |
| NL406_RS18370 (3592906) | 3592906..3594150 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| NL406_RS18375 (3594242) | 3594242..3594700 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NL406_RS18380 (3594961) | 3594961..3596418 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| NL406_RS18385 (3596475) | 3596475..3596996 | - | 522 | Protein_3450 | peptide chain release factor H | - |
| NL406_RS18390 (3596995) | 3596995..3597198 | - | 204 | Protein_3451 | RtcB family protein | - |
| NL406_RS18395 (3597444) | 3597444..3597896 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| NL406_RS18400 (3597906) | 3597906..3598304 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NL406_RS18405 (3598307) | 3598307..3598600 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NL406_RS18410 (3598652) | 3598652..3599707 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NL406_RS18415 (3599778) | 3599778..3600701 | - | 924 | WP_087899588.1 | putative lateral flagellar export/assembly protein LafU | - |
| NL406_RS18420 (3600704) | 3600704..3601567 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| NL406_RS18425 (3601580) | 3601580..3602296 | - | 717 | WP_000938730.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| NL406_RS18430 (3602316) | 3602316..3602783 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|