MGE detailed information
MGE type: Genomic_island MGE length: 55955 bp
Accession: NZ_CP116900 Location: 4221096..4277050 Organism: Escherichia coli strain XH2172 Replicon: chromosome
Accession: NZ_CP116900 Location: 4221096..4277050 Organism: Escherichia coli strain XH2172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PH219_RS20375 (4216561) | 4216561..4217718 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| PH219_RS20380 (4217726) | 4217726..4219207 | - | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| PH219_RS20385 (4219149) | 4219149..4219682 | - | 534 | WP_000857399.1 | O-acetyl-ADP-ribose deacetylase | - |
| PH219_RS20390 (4219777) | 4219777..4220088 | - | 312 | WP_060621315.1 | protein YmdA | - |
| PH219_RS20395 (4220209) | 4220209..4220541 | - | 333 | WP_000992831.1 | curli assembly chaperone CsgC | - |
| PH219_RS20400 (4220600) | 4220600..4221055 | - | 456 | WP_000771437.1 | curli major subunit CsgA | - |
| PH219_RS20405 (4221096) | 4221096..4221539 | - | 444 | WP_272591844.1 | Minor curlin subunit | VF |
| PH219_RS20410 (4222293) | 4222293..4222943 | + | 651 | WP_001678504.1 | CsgBAC operon transcriptional regulatory protein | VF |
| PH219_RS20415 (4222948) | 4222948..4223337 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| PH219_RS20420 (4223362) | 4223362..4223778 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| PH219_RS20425 (4223805) | 4223805..4224638 | + | 834 | WP_001372924.1 | Curli production assembly/transport component CsgG | VF |
| PH219_RS20430 (4224702) | 4224702..4225193 | - | 492 | WP_001297187.1 | DUF1097 domain-containing protein | - |
| PH219_RS20435 (4225295) | 4225295..4225849 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| PH219_RS20440 (4225873) | 4225873..4226610 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| PH219_RS20445 (4226665) | 4226665..4227603 | - | 939 | WP_000351311.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| PH219_RS20455 (4228074) | 4228074..4228915 | - | 842 | Protein_3990 | DUF4942 domain-containing protein | - |
| PH219_RS20460 (4229000) | 4229000..4229197 | - | 198 | WP_000839253.1 | DUF957 domain-containing protein | - |
| PH219_RS20465 (4229214) | 4229214..4229702 | - | 489 | WP_032180032.1 | DUF5983 family protein | - |
| PH219_RS20470 (4229699) | 4229699..4230082 | - | 384 | WP_000854686.1 | TA system toxin CbtA family protein | Toxin Detail |
| PH219_RS20475 (4230163) | 4230163..4230543 | - | 381 | WP_001285602.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PH219_RS20480 (4230554) | 4230554..4231237 | - | 684 | WP_000086768.1 | hypothetical protein | - |
| PH219_RS20485 (4231256) | 4231256..4231477 | - | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| PH219_RS20490 (4231540) | 4231540..4232016 | - | 477 | WP_001186726.1 | RadC family protein | - |
| PH219_RS20495 (4232032) | 4232032..4232517 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| PH219_RS20500 (4232609) | 4232609..4233430 | - | 822 | WP_001761104.1 | DUF932 domain-containing protein | - |
| PH219_RS20505 (4233531) | 4233531..4233739 | - | 209 | Protein_4000 | DUF905 family protein | - |
| PH219_RS20510 (4233840) | 4233840..4234295 | - | 456 | WP_000581506.1 | IrmA family protein | - |
| PH219_RS20515 (4234371) | 4234371..4236887 | - | 2517 | WP_001531238.1 | hypothetical protein | - |
| PH219_RS20520 (4237008) | 4237008..4239854 | - | 2847 | WP_032180029.1 | Ag43/Cah family autotransporter adhesin | - |
| PH219_RS20525 (4240226) | 4240226..4241098 | - | 873 | WP_001069760.1 | GTPase family protein | - |
| PH219_RS20530 (4241466) | 4241466..4242161 | - | 696 | WP_032180028.1 | hypothetical protein | - |
| PH219_RS20535 (4242164) | 4242164..4242670 | - | 507 | WP_032180027.1 | hypothetical protein | - |
| PH219_RS20540 (4242667) | 4242667..4243497 | - | 831 | WP_001399639.1 | Sporulation initiation inhibitor protein Soj | VF |
| PH219_RS20545 (4244819) | 4244819..4245058 | + | 240 | WP_024224214.1 | hypothetical protein | - |
| PH219_RS20550 (4245098) | 4245098..4247536 | + | 2439 | WP_032180025.1 | type I restriction-modification system subunit M | - |
| PH219_RS20555 (4247536) | 4247536..4248891 | + | 1356 | WP_223349791.1 | restriction endonuclease subunit S | - |
| PH219_RS20560 (4248904) | 4248904..4249560 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| PH219_RS20565 (4249557) | 4249557..4250624 | + | 1068 | WP_000634203.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| PH219_RS20570 (4250643) | 4250643..4253738 | + | 3096 | WP_000108736.1 | HsdR family type I site-specific deoxyribonuclease | - |
| PH219_RS20575 (4253738) | 4253738..4254454 | + | 717 | WP_001122107.1 | SprT family zinc-dependent metalloprotease | - |
| PH219_RS20580 (4254799) | 4254799..4255413 | + | 615 | Protein_4015 | IS3 family transposase ISSd1 | Transposase |
| PH219_RS20585 (4255657) | 4255657..4256955 | - | 1299 | WP_000262203.1 | anaerobic C4-dicarboxylate transporter | - |
| PH219_RS20590 (4257021) | 4257021..4257740 | - | 720 | WP_000677245.1 | amino acid racemase | - |
| PH219_RS20595 (4258091) | 4258091..4259029 | + | 939 | WP_000789104.1 | HTH-type transcriptional regulator YjiE | VF |
| PH219_RS20600 (4259147) | 4259147..4259605 | - | 459 | WP_021513032.1 | IS200-IS605 family transposase IS200C | Transposase |
| PH219_RS20605 (4259685) | 4259685..4260176 | + | 492 | Protein_4020 | putative protein YggR | VF |
| PH219_RS20610 (4260334) | 4260334..4261479 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PH219_RS20615 (4261803) | 4261803..4263065 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PH219_RS20620 (4263331) | 4263331..4264677 | - | 1347 | WP_000483766.1 | IS4 family transposase IS4 | Transposase |
| PH219_RS20625 (4265156) | 4265156..4265311 | - | 156 | Protein_4024 | tellurite resistance protein | - |
| PH219_RS20630 (4265453) | 4265453..4266235 | - | 783 | WP_072129716.1 | IS21 family transposase IS100kyp | Transposase |
| PH219_RS20635 (4266232) | 4266232..4267254 | - | 1023 | Protein_4026 | IS21 family transposase IS100kyp | Transposase |
| PH219_RS20640 (4267617) | 4267617..4267874 | - | 258 | Protein_4027 | replication endonuclease | - |
| PH219_RS20645 (4267965) | 4267965..4269503 | - | 1539 | WP_032180022.1 | IS66 family transposase ISEc8 | Transposase |
| PH219_RS20650 (4269553) | 4269553..4269900 | - | 348 | WP_000612601.1 | IS66 family transposase ISEc8 | Transposase |
| PH219_RS20655 (4269897) | 4269897..4270277 | - | 381 | WP_021566758.1 | IS66 family transposase ISEc8 | Transposase |
| PH219_RS20660 (4270490) | 4270490..4270600 | + | 111 | Protein_4031 | transposase domain-containing protein | - |
| PH219_RS20665 (4270732) | 4270732..4271745 | - | 1014 | WP_000107485.1 | aldose 1-epimerase family protein | - |
| PH219_RS20670 (4271757) | 4271757..4273073 | - | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| PH219_RS20675 (4273101) | 4273101..4274021 | - | 921 | WP_000350265.1 | ribokinase | - |
| PH219_RS20680 (4274327) | 4274327..4275109 | + | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| PH219_RS20685 (4275111) | 4275111..4275337 | - | 227 | Protein_4036 | acetolactate synthase small subunit | - |
| PH219_RS20695 (4277353) | 4277353..4277490 | - | 138 | WP_154761740.1 | hypothetical protein | - |
| PH219_RS20700 (4277640) | 4277640..4278808 | + | 1169 | Protein_4039 | UxaA family hydrolase | - |
| PH219_RS20705 (4278871) | 4278871..4279695 | - | 825 | WP_000072197.1 | aga operon transcriptional regulator AgaR | - |
| PH219_RS20710 (4279944) | 4279944..4280018 | + | 75 | Protein_4041 | aldolase | - |
| PH219_RS20715 (4280025) | 4280025..4280282 | + | 258 | Protein_4042 | class II fructose-bisphosphate aldolase | - |
| PH219_RS20720 (4280396) | 4280396..4281967 | + | 1572 | WP_000192271.1 | maltose/glucose-specific PTS transporter subunit IIBC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|