MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76412 bp
Accession: NZ_CP116672 Location: 1416869..1493280 Organism: Xanthomonas hortorum pv. pelargonii strain 305 Replicon: chromosome
Accession: NZ_CP116672 Location: 1416869..1493280 Organism: Xanthomonas hortorum pv. pelargonii strain 305 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PML25_RS05850 (PML25_05850) | 1412275..1412799 | + | 525 | WP_272164452.1 | hypothetical protein | - |
| PML25_RS05855 (PML25_05855) | 1412732..1413739 | + | 1008 | WP_168960128.1 | hypothetical protein | - |
| PML25_RS05860 (PML25_05860) | 1413844..1414734 | + | 891 | WP_251755212.1 | MobA/MobL family protein | - |
| PML25_RS05865 (PML25_05865) | 1414960..1415352 | - | 393 | WP_168960056.1 | hypothetical protein | - |
| PML25_RS05870 (PML25_05870) | 1415402..1415713 | - | 312 | WP_011269839.1 | hypothetical protein | - |
| PML25_RS05875 (PML25_05875) | 1415905..1416258 | + | 354 | WP_180336617.1 | helix-turn-helix transcriptional regulator | - |
| PML25_RS05880 (PML25_05880) | 1416521..1418224 | + | 1704 | WP_168960055.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PML25_RS05885 (PML25_05885) | 1418269..1418724 | + | 456 | WP_168960054.1 | hypothetical protein | - |
| PML25_RS05890 (PML25_05890) | 1418721..1422404 | + | 3684 | WP_233366659.1 | peptidoglycan-binding protein | - |
| PML25_RS05900 (PML25_05900) | 1423912..1425210 | + | 1299 | WP_272164465.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PML25_RS05905 (PML25_05905) | 1425207..1427423 | + | 2217 | WP_168960052.1 | peptidase domain-containing ABC transporter | - |
| PML25_RS05910 (PML25_05910) | 1427530..1428342 | + | 813 | WP_006450247.1 | hypothetical protein | - |
| PML25_RS05915 (PML25_05915) | 1428382..1428906 | + | 525 | WP_168960051.1 | hypothetical protein | - |
| PML25_RS05920 (PML25_05920) | 1429056..1429970 | - | 915 | WP_272164453.1 | ABC transporter permease | - |
| PML25_RS05925 (PML25_05925) | 1430018..1431126 | + | 1109 | WP_256627460.1 | IS3 family transposase ISXca2 | Transposase |
| PML25_RS05930 (PML25_05930) | 1431064..1431537 | - | 474 | WP_272164454.1 | hypothetical protein | - |
| PML25_RS05935 (PML25_05935) | 1431600..1432031 | - | 432 | WP_168960049.1 | toxin-activating lysine-acyltransferase | - |
| PML25_RS05940 (PML25_05940) | 1432021..1433835 | - | 1815 | WP_168960048.1 | protein adenylyltransferase SelO family protein | - |
| PML25_RS05945 (PML25_05945) | 1434330..1435973 | + | 1644 | WP_168960047.1 | MobA/MobL family protein | - |
| PML25_RS05950 (PML25_05950) | 1436341..1437321 | - | 981 | WP_256627476.1 | IS5 family transposase IS1646 | Transposase |
| PML25_RS05955 (PML25_05955) | 1437583..1438272 | + | 690 | WP_233366544.1 | hypothetical protein | - |
| PML25_RS05960 (PML25_05960) | 1438377..1439111 | - | 735 | WP_168958928.1 | hypothetical protein | - |
| PML25_RS05965 (PML25_05965) | 1439155..1439604 | - | 450 | WP_168958929.1 | DUF6527 family protein | - |
| PML25_RS05970 (PML25_05970) | 1439601..1440758 | - | 1158 | WP_272164455.1 | ThiF family adenylyltransferase | - |
| PML25_RS05975 (PML25_05975) | 1440786..1441766 | + | 981 | WP_233366556.1 | IS5 family transposase IS1646 | Transposase |
| PML25_RS05980 (PML25_05980) | 1441923..1442618 | - | 696 | WP_168958931.1 | multiubiquitin domain-containing protein | - |
| PML25_RS05985 (PML25_05985) | 1442766..1443092 | + | 327 | WP_168958932.1 | helix-turn-helix transcriptional regulator | - |
| PML25_RS05990 (PML25_05990) | 1443105..1444010 | + | 906 | WP_168958933.1 | ImmA/IrrE family metallo-endopeptidase | - |
| PML25_RS05995 (PML25_05995) | 1444272..1445486 | - | 1215 | WP_168958934.1 | MFS transporter | - |
| PML25_RS06000 (PML25_06000) | 1445483..1446676 | - | 1194 | WP_168958935.1 | Esterase EstB | VF |
| PML25_RS06005 (PML25_06005) | 1446790..1447710 | + | 921 | WP_168958936.1 | HTH-type transcriptional regulator PgrR | VF |
| PML25_RS06010 (PML25_06010) | 1447809..1448231 | + | 423 | WP_168958937.1 | YqaA family protein | - |
| PML25_RS06015 (PML25_06015) | 1448522..1450768 | - | 2247 | WP_168958938.1 | hypothetical protein | VF |
| PML25_RS06020 (PML25_06020) | 1451222..1451506 | + | 285 | WP_043889393.1 | hypothetical protein | - |
| PML25_RS06025 (PML25_06025) | 1451503..1451772 | - | 270 | WP_168958939.1 | hypothetical protein | - |
| PML25_RS06030 (PML25_06030) | 1451936..1453123 | - | 1188 | WP_168958940.1 | hypothetical protein | - |
| PML25_RS06035 (PML25_06035) | 1453378..1453773 | + | 396 | WP_168959001.1 | hypothetical protein | - |
| PML25_RS06040 (PML25_06040) | 1453862..1454254 | + | 393 | WP_055824272.1 | H-NS family nucleoid-associated regulatory protein | - |
| PML25_RS06045 (PML25_06045) | 1454612..1456744 | - | 2133 | WP_168958942.1 | glycogen debranching protein GlgX | - |
| PML25_RS06050 (PML25_06050) | 1457239..1458159 | + | 921 | WP_168958943.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| PML25_RS06055 (PML25_06055) | 1458503..1459180 | + | 678 | WP_006448355.1 | Transcriptional regulatory protein TcrA | VF |
| PML25_RS06060 (PML25_06060) | 1459173..1460507 | + | 1335 | WP_168958944.1 | HAMP domain-containing sensor histidine kinase | - |
| PML25_RS06065 (PML25_06065) | 1460656..1461147 | - | 492 | WP_168958945.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PML25_RS06070 (PML25_06070) | 1461144..1461434 | - | 291 | WP_168958946.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PML25_RS06075 (PML25_06075) | 1461510..1461911 | - | 402 | WP_168958947.1 | SymE family type I addiction module toxin | - |
| PML25_RS06080 (PML25_06080) | 1462440..1463063 | - | 624 | WP_168958948.1 | dephospho-CoA kinase | - |
| PML25_RS06085 (PML25_06085) | 1463077..1463940 | - | 864 | WP_016849610.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| PML25_RS06090 (PML25_06090) | 1463947..1465206 | - | 1260 | WP_168958949.1 | Type II secretion system protein F | VF |
| PML25_RS06095 (PML25_06095) | 1465558..1465983 | + | 426 | WP_168958950.1 | Fimbrial protein | VF |
| PML25_RS06100 (PML25_06100) | 1466119..1467708 | + | 1590 | WP_168958951.1 | phosphoethanolamine transferase | - |
| PML25_RS06105 (PML25_06105) | 1467779..1468348 | + | 570 | WP_233366553.1 | hypothetical protein | - |
| PML25_RS06110 (PML25_06110) | 1468345..1469844 | + | 1500 | WP_233366545.1 | hypothetical protein | - |
| PML25_RS06115 (PML25_06115) | 1469879..1471615 | + | 1737 | WP_168958954.1 | hypothetical protein | VF |
| PML25_RS06120 (PML25_06120) | 1471624..1472241 | - | 618 | WP_168958955.1 | putative protein adenylyltransferase Fic | VF |
| PML25_RS06125 (PML25_06125) | 1472238..1472420 | - | 183 | WP_074066024.1 | YhfG family protein | - |
| PML25_RS06130 (PML25_06130) | 1472494..1473948 | - | 1455 | WP_180336569.1 | Regulatory protein AtoC | VF |
| PML25_RS06135 (PML25_06135) | 1474034..1475647 | - | 1614 | WP_168958956.1 | Adaptive-response sensory-kinase SasA | VF |
| PML25_RS06140 (PML25_06140) | 1475880..1477049 | + | 1170 | WP_006450728.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| PML25_RS06145 (PML25_06145) | 1477074..1477949 | + | 876 | WP_006450729.1 | succinate--CoA ligase subunit alpha | - |
| PML25_RS06150 (PML25_06150) | 1478132..1479073 | - | 942 | WP_168958957.1 | HTH-type transcriptional regulator DmlR | VF |
| PML25_RS06155 (PML25_06155) | 1479154..1479330 | + | 177 | WP_218974074.1 | hypothetical protein | - |
| PML25_RS06160 (PML25_06160) | 1479394..1479798 | + | 405 | WP_218974075.1 | hypothetical protein | - |
| PML25_RS06165 (PML25_06165) | 1480222..1481043 | + | 822 | WP_233366546.1 | MBL fold metallo-hydrolase | - |
| PML25_RS06170 (PML25_06170) | 1481048..1481443 | + | 396 | WP_168958959.1 | nuclear transport factor 2 family protein | - |
| PML25_RS06175 (PML25_06175) | 1481937..1483577 | + | 1641 | WP_168958960.1 | NAD+ synthase | - |
| PML25_RS06180 (PML25_06180) | 1483571..1484548 | - | 978 | WP_168958961.1 | hypothetical protein | - |
| PML25_RS06185 (PML25_06185) | 1484893..1485774 | - | 882 | WP_168958962.1 | outer membrane protein assembly factor BamD | - |
| PML25_RS06190 (PML25_06190) | 1485894..1486889 | + | 996 | WP_168958963.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| PML25_RS06195 (PML25_06195) | 1486891..1487706 | + | 816 | WP_168958964.1 | peptidoglycan editing factor PgeF | - |
| PML25_RS06200 (PML25_06200) | 1487709..1488233 | + | 525 | WP_168958965.1 | DUF4166 domain-containing protein | - |
| PML25_RS06205 (PML25_06205) | 1488349..1488774 | + | 426 | WP_168958966.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| PML25_RS06210 (PML25_06210) | 1489037..1490905 | - | 1869 | WP_168958967.1 | hypothetical protein | VF |
| PML25_RS06215 (PML25_06215) | 1491340..1493778 | - | 2439 | WP_180336570.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
| PML25_RS06220 (PML25_06220) | 1494387..1495754 | - | 1368 | WP_023904889.1 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | - |
| PML25_RS06225 (PML25_06225) | 1495751..1497529 | - | 1779 | WP_272164456.1 | glycoside hydrolase family 15 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|