MGE detailed information
MGE type: Prophage MGE length: 36330 bp
Accession: NZ_CP116478 Location: 5616466..5652795 Organism: Pseudomonas syringae pv. actinidiae strain PSA.AH.01 Replicon: chromosome
Accession: NZ_CP116478 Location: 5616466..5652795 Organism: Pseudomonas syringae pv. actinidiae strain PSA.AH.01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PHA47_RS25000 (PHA47_25000) | 5611624..5612673 | + | 1050 | WP_017684145.1 | LLM class flavin-dependent oxidoreductase | - |
| PHA47_RS25005 (PHA47_25005) | 5612709..5612954 | + | 246 | WP_017684146.1 | phosphopantetheine-binding protein | - |
| PHA47_RS25010 (PHA47_25010) | 5613624..5614532 | + | 909 | WP_017699469.1 | hypothetical protein | - |
| PHA47_RS25015 (PHA47_25015) | 5614615..5615985 | - | 1371 | WP_024533419.1 | hypothetical protein | - |
| PHA47_RS25020 (PHA47_25020) | 5616130..5617196 | + | 1067 | Protein_4941 | IS630-like element ISPsy32 family transposase | - |
| PHA47_RS25025 (PHA47_25025) | 5618153..5618947 | + | 795 | WP_017685181.1 | hypothetical protein | - |
| PHA47_RS25030 (PHA47_25030) | 5619277..5620790 | + | 1514 | Protein_4943 | IS21 family transposase ISPsy41 | Transposase |
| PHA47_RS25035 (PHA47_25035) | 5620811..5621566 | + | 756 | WP_017699032.1 | IS21 family transposase ISPsy41 | Transposase |
| PHA47_RS25040 (PHA47_25040) | 5622462..5623016 | - | 555 | WP_003381924.1 | hypothetical protein | - |
| PHA47_RS25045 (PHA47_25045) | 5623881..5624723 | - | 843 | WP_020362659.1 | AvrPphF family type III effector | - |
| PHA47_RS25050 (PHA47_25050) | 5624740..5625132 | - | 393 | WP_017684869.1 | CesT family type III secretion system chaperone | - |
| PHA47_RS25055 (PHA47_25055) | 5625539..5626558 | + | 1020 | WP_017684870.1 | tyrosine phosphatase | - |
| PHA47_RS25060 (PHA47_25060) | 5627243..5627896 | - | 654 | WP_237243104.1 | DUF3800 domain-containing protein | - |
| PHA47_RS25065 (PHA47_25065) | 5627926..5628123 | + | 198 | WP_237243103.1 | hypothetical protein | - |
| PHA47_RS25070 (PHA47_25070) | 5628241..5628471 | - | 231 | WP_017684872.1 | hypothetical protein | - |
| PHA47_RS25075 (PHA47_25075) | 5628654..5628878 | - | 225 | WP_003407134.1 | carbon storage regulator | - |
| PHA47_RS25080 (PHA47_25080) | 5629089..5629340 | - | 252 | WP_017684873.1 | hypothetical protein | - |
| PHA47_RS25085 (PHA47_25085) | 5629355..5629735 | - | 381 | WP_017684874.1 | hypothetical protein | - |
| PHA47_RS25090 (PHA47_25090) | 5629778..5629936 | - | 159 | WP_003381934.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| PHA47_RS25095 (PHA47_25095) | 5629926..5630521 | - | 596 | Protein_4956 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| PHA47_RS25100 (PHA47_25100) | 5630944..5631654 | - | 711 | WP_223227236.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| PHA47_RS25105 (PHA47_25105) | 5632397..5633239 | - | 843 | WP_074291504.1 | AvrPphF family type III effector | - |
| PHA47_RS25110 (PHA47_25110) | 5633252..5633647 | - | 396 | WP_017685097.1 | CesT family type III secretion system chaperone | - |
| PHA47_RS25115 (PHA47_25115) | 5633841..5634119 | + | 279 | Protein_4960 | IS91 family transposase IS801 | Transposase |
| PHA47_RS25120 (PHA47_25120) | 5634340..5634587 | + | 248 | Protein_4961 | recombinase family protein | - |
| PHA47_RS25125 (PHA47_25125) | 5634637..5635293 | - | 657 | WP_004666980.1 | YopT-type cysteine protease domain-containing protein | - |
| PHA47_RS25130 (PHA47_25130) | 5635430..5636496 | - | 1067 | Protein_4963 | IS630-like element ISPsy32 family transposase | - |
| PHA47_RS25135 (PHA47_25135) | 5636774..5637745 | - | 972 | WP_017685029.1 | AAA family ATPase | - |
| PHA47_RS25140 (PHA47_25140) | 5637735..5639372 | - | 1638 | WP_198407578.1 | IS481 family transposase ISAzs36 | Transposase |
| PHA47_RS25145 (PHA47_25145) | 5639377..5639937 | - | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| PHA47_RS25150 (PHA47_25150) | 5640526..5641530 | - | 1005 | WP_020313558.1 | hypothetical protein | - |
| PHA47_RS25155 (PHA47_25155) | 5641663..5642049 | - | 387 | WP_271968577.1 | CesT family type III secretion system chaperone | - |
| PHA47_RS25160 (PHA47_25160) | 5642135..5643201 | - | 1067 | Protein_4969 | IS630-like element ISPsy32 family transposase | - |
| PHA47_RS25165 (PHA47_25165) | 5643303..5643470 | - | 168 | Protein_4970 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PHA47_RS25170 (PHA47_25170) | 5643534..5643707 | - | 174 | Protein_4971 | helix-turn-helix domain-containing protein | - |
| PHA47_RS25175 (PHA47_25175) | 5643761..5644498 | - | 738 | Protein_4972 | YopT-type cysteine protease domain-containing protein | - |
| PHA47_RS25180 (PHA47_25180) | 5644514..5645580 | - | 1067 | Protein_4973 | IS630 family transposase | - |
| PHA47_RS25185 (PHA47_25185) | 5646440..5646634 | - | 195 | WP_017684246.1 | hypothetical protein | - |
| PHA47_RS25190 (PHA47_25190) | 5647192..5648124 | + | 933 | WP_020308919.1 | XopAH/AvrB family type III secretion system effector | - |
| PHA47_RS25195 (PHA47_25195) | 5648933..5649187 | - | 255 | WP_003381350.1 | hypothetical protein | - |
| PHA47_RS25200 (PHA47_25200) | 5649235..5649891 | - | 657 | WP_017684244.1 | hypothetical protein | - |
| PHA47_RS25205 (PHA47_25205) | 5650238..5650495 | + | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PHA47_RS25210 (PHA47_25210) | 5650492..5650911 | + | 420 | WP_017684243.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PHA47_RS25215 (PHA47_25215) | 5650952..5651585 | + | 634 | Protein_4980 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PHA47_RS25220 (PHA47_25220) | 5651860..5652795 | + | 936 | WP_017704392.1 | AvrD family protein | - |
| PHA47_RS25225 (PHA47_25225) | 5653136..5653783 | + | 648 | WP_017703697.1 | histidine phosphatase family protein | - |
| PHA47_RS25230 (PHA47_25230) | 5654022..5654849 | + | 828 | WP_003381339.1 | TauD/TfdA family dioxygenase | - |
| PHA47_RS25235 (PHA47_25235) | 5654867..5655901 | + | 1035 | WP_017684240.1 | sulfotransferase | - |
| PHA47_RS25240 (PHA47_25240) | 5655942..5657144 | + | 1203 | WP_017684239.1 | aspartate aminotransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|