MGE detailed information
MGE type: Prophage MGE length: 38439 bp
Accession: NZ_CP116477 Location: 4180959..4219397 Organism: Pectobacterium sp. A5351 Replicon: chromosome
Accession: NZ_CP116477 Location: 4180959..4219397 Organism: Pectobacterium sp. A5351 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1Q74_RS19230 (O1Q74_19230) | 4176234..4177217 | + | 984 | WP_271875089.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| O1Q74_RS19235 (O1Q74_19235) | 4177244..4178500 | + | 1257 | WP_271875090.1 | O-antigen ligase family protein | - |
| O1Q74_RS19240 (O1Q74_19240) | 4178693..4179763 | + | 1071 | WP_271875091.1 | lipopolysaccharide core heptosyltransferase RfaQ | - |
| O1Q74_RS19245 (O1Q74_19245) | 4179760..4180884 | + | 1125 | WP_271875092.1 | glycosyltransferase family 4 protein | - |
| O1Q74_RS19250 (O1Q74_19250) | 4180959..4181972 | + | 1014 | WP_271875093.1 | lipopolysaccharide 3-alpha-galactosyltransferase | - |
| O1Q74_RS19255 (O1Q74_19255) | 4182023..4183045 | + | 1023 | WP_271875094.1 | glycosyltransferase | - |
| O1Q74_RS19260 (O1Q74_19260) | 4183201..4184232 | + | 1032 | WP_271875095.1 | UDP-glucose 4-epimerase | VF |
| O1Q74_RS19265 (O1Q74_19265) | 4184339..4185214 | + | 876 | WP_271875096.1 | protein YibB | - |
| O1Q74_RS19270 (O1Q74_19270) | 4185412..4186137 | + | 726 | WP_271875097.1 | hypothetical protein | - |
| O1Q74_RS19275 (O1Q74_19275) | 4186198..4187172 | + | 975 | WP_271875098.1 | hypothetical protein | - |
| O1Q74_RS19280 (O1Q74_19280) | 4187296..4188045 | - | 750 | WP_271875099.1 | glycosyltransferase family 25 protein | - |
| O1Q74_RS19285 (O1Q74_19285) | 4188132..4188896 | + | 765 | WP_258883510.1 | hypothetical protein | VF |
| O1Q74_RS19290 (O1Q74_19290) | 4188959..4189819 | + | 861 | WP_271875100.1 | glycosyltransferase | - |
| O1Q74_RS19295 (O1Q74_19295) | 4190046..4191323 | + | 1278 | WP_271875101.1 | 3-deoxy-D-manno-octulosonic acid transferase | VF |
| O1Q74_RS19300 (O1Q74_19300) | 4191360..4191848 | + | 489 | WP_271878990.1 | Phosphopantetheine adenylyltransferase | VF |
| O1Q74_RS19305 (O1Q74_19305) | 4191854..4192843 | - | 990 | WP_271875102.1 | hypothetical protein | VF |
| O1Q74_RS19310 (O1Q74_19310) | 4192895..4193704 | - | 810 | WP_271875103.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
| O1Q74_RS19315 (O1Q74_19315) | 4193933..4194100 | - | 168 | WP_002442576.1 | 50S ribosomal protein L33 | - |
| O1Q74_RS19320 (O1Q74_19320) | 4194112..4194348 | - | 237 | WP_005967968.1 | 50S ribosomal protein L28 | - |
| O1Q74_RS19325 (O1Q74_19325) | 4194586..4195251 | - | 666 | WP_271875104.1 | DNA repair protein RadC | - |
| O1Q74_RS19330 (O1Q74_19330) | 4195438..4196682 | + | 1245 | WP_271878992.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| O1Q74_RS19335 (O1Q74_19335) | 4196660..4197118 | + | 459 | WP_271875105.1 | dUTP diphosphatase | - |
| O1Q74_RS19340 (O1Q74_19340) | 4197248..4197844 | + | 597 | WP_271875106.1 | nucleoid occlusion factor SlmA | - |
| O1Q74_RS19345 (O1Q74_19345) | 4197895..4198536 | - | 642 | WP_271875107.1 | orotate phosphoribosyltransferase | - |
| O1Q74_RS19350 (O1Q74_19350) | 4198595..4199311 | - | 717 | WP_271875108.1 | ribonuclease PH | - |
| O1Q74_RS19355 (O1Q74_19355) | 4199517..4200482 | + | 966 | WP_271878994.1 | L-Ala-D/L-Glu epimerase | - |
| O1Q74_RS19360 (O1Q74_19360) | 4200531..4202402 | + | 1872 | WP_271875109.1 | Glutathione import ATP-binding protein GsiA | VF |
| O1Q74_RS19365 (O1Q74_19365) | 4202504..4204045 | + | 1542 | WP_271875110.1 | glutathione ABC transporter substrate-binding protein | - |
| O1Q74_RS19370 (O1Q74_19370) | 4204193..4205215 | + | 1023 | WP_271875111.1 | IS110 family transposase ISEc11 | Transposase |
| O1Q74_RS19375 (O1Q74_19375) | 4205494..4206414 | + | 921 | WP_014913740.1 | ABC transporter permease subunit | - |
| O1Q74_RS19380 (O1Q74_19380) | 4206423..4207322 | + | 900 | WP_039347894.1 | ABC transporter permease subunit | - |
| O1Q74_RS19385 (O1Q74_19385) | 4207349..4208407 | + | 1059 | WP_271878996.1 | P1 family peptidase | - |
| O1Q74_RS19390 (O1Q74_19390) | 4208434..4209255 | + | 822 | WP_271878998.1 | M55 family metallopeptidase | - |
| O1Q74_RS19395 (O1Q74_19395) | 4209316..4210263 | + | 948 | WP_271875112.1 | isoaspartyl peptidase/L-asparaginase | - |
| O1Q74_RS19400 (O1Q74_19400) | 4210593..4211501 | + | 909 | WP_271875113.1 | LysR family transcriptional regulator | - |
| O1Q74_RS19405 (O1Q74_19405) | 4211600..4212463 | + | 864 | WP_039278589.1 | YicC/YloC family endoribonuclease | - |
| O1Q74_RS19410 (O1Q74_19410) | 4212650..4213909 | + | 1260 | WP_271875114.1 | Prophage integrase IntA ; Integrase | Integrase |
| O1Q74_RS19415 (O1Q74_19415) | 4214164..4214373 | + | 210 | Protein_3766 | IS630 family transposase | - |
| O1Q74_RS19420 (O1Q74_19420) | 4214948..4215772 | + | 825 | WP_271875115.1 | DNA damage-inducible protein D | - |
| O1Q74_RS19425 (O1Q74_19425) | 4215988..4216875 | - | 888 | WP_271875116.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| O1Q74_RS19430 (O1Q74_19430) | 4216902..4217426 | - | 525 | WP_271875117.1 | hypothetical protein | Antitoxin Detail |
| O1Q74_RS19435 (O1Q74_19435) | 4218034..4219397 | + | 1364 | WP_271873361.1 | IS3 family transposase ISKpn1 | Transposase |
| O1Q74_RS19440 (O1Q74_19440) | 4219949..4220176 | + | 228 | WP_271875118.1 | hypothetical protein | - |
| O1Q74_RS19445 (O1Q74_19445) | 4220398..4220943 | - | 546 | WP_271875119.1 | hypothetical protein | - |
| O1Q74_RS19450 (O1Q74_19450) | 4221254..4221640 | + | 387 | WP_271875120.1 | hypothetical protein | - |
| O1Q74_RS19455 (O1Q74_19455) | 4221678..4221764 | + | 87 | WP_271879000.1 | DUF596 domain-containing protein | - |
| O1Q74_RS19460 (O1Q74_19460) | 4221775..4222980 | - | 1206 | WP_271875121.1 | AI-2E family transporter | - |
| O1Q74_RS19465 (O1Q74_19465) | 4223074..4223574 | - | 501 | WP_271875122.1 | GrpB family protein | - |
| O1Q74_RS19470 (O1Q74_19470) | 4223740..4223967 | - | 228 | WP_271875123.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|