MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103482 bp
Accession: NZ_CP116427 Location: 1..103482 Organism: Sulfitobacter faviae strain SCSIO W_1865 Replicon: plasmid unnamed4
Accession: NZ_CP116427 Location: 1..103482 Organism: Sulfitobacter faviae strain SCSIO W_1865 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL336_RS19185 (PL336_19185) | 1..2544 | + | 2544 | WP_081285331.1 | TerB N-terminal domain-containing protein | - |
| PL336_RS19190 (PL336_19190) | 2522..3829 | + | 1308 | WP_065331076.1 | ATP-binding protein | - |
| PL336_RS19195 (PL336_19195) | 3835..6012 | + | 2178 | WP_065331075.1 | DEAD/DEAH box helicase | - |
| PL336_RS19200 (PL336_19200) | 6015..8669 | + | 2655 | WP_065331074.1 | PD-(D/E)XK nuclease family protein | - |
| PL336_RS19205 (PL336_19205) | 8666..12061 | + | 3396 | WP_065331073.1 | UvrD-helicase domain-containing protein | - |
| PL336_RS19210 (PL336_19210) | 12076..15414 | + | 3339 | WP_120352554.1 | DEAD/DEAH box helicase family protein | - |
| PL336_RS19215 (PL336_19215) | 16412..16750 | + | 339 | WP_017470241.1 | DUF736 family protein | - |
| PL336_RS19220 (PL336_19220) | 17388..17564 | + | 177 | WP_162931915.1 | hypothetical protein | - |
| PL336_RS19225 (PL336_19225) | 17978..18598 | + | 621 | WP_065331070.1 | helix-turn-helix domain-containing protein | - |
| PL336_RS19230 (PL336_19230) | 18591..20519 | + | 1929 | WP_065331069.1 | T-DNA border endonuclease VirD2 | Relaxase |
| PL336_RS19235 (PL336_19235) | 20536..22449 | + | 1914 | WP_120352558.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PL336_RS19240 (PL336_19240) | 22560..22769 | - | 210 | WP_065331067.1 | KTSC domain-containing protein | - |
| PL336_RS19245 (PL336_19245) | 22769..24586 | - | 1818 | WP_081285330.1 | ATP-binding protein | - |
| PL336_RS19250 (PL336_19250) | 24583..25797 | - | 1215 | WP_081285333.1 | SIR2 family protein | - |
| PL336_RS19255 (PL336_19255) | 26157..27092 | - | 936 | WP_162619162.1 | WYL domain-containing protein | - |
| PL336_RS19260 (PL336_19260) | 27066..28157 | + | 1092 | WP_247740487.1 | exonuclease SbcCD subunit D | - |
| PL336_RS19265 (PL336_19265) | 28154..31234 | + | 3081 | WP_065331063.1 | SMC family ATPase | - |
| PL336_RS19270 (PL336_19270) | 31629..31877 | + | 249 | WP_065331062.1 | hypothetical protein | - |
| PL336_RS19275 (PL336_19275) | 31987..32928 | + | 942 | WP_065331061.1 | toll/interleukin-1 receptor domain-containing protein | - |
| PL336_RS19280 (PL336_19280) | 33108..33629 | + | 522 | WP_065331060.1 | hypothetical protein | - |
| PL336_RS19285 (PL336_19285) | 33769..34758 | - | 990 | WP_065331059.1 | Type IV secretion system protein VirB11 | VF |
| PL336_RS19290 (PL336_19290) | 34758..36182 | - | 1425 | WP_065331058.1 | Protein virB10 | VF |
| PL336_RS19295 (PL336_19295) | 36185..36919 | - | 735 | WP_065331057.1 | Protein virB9 | VF |
| PL336_RS19300 (PL336_19300) | 36925..37605 | - | 681 | WP_065331056.1 | Type IV secretion system protein PtlE | VF |
| PL336_RS19305 (PL336_19305) | 37623..38636 | - | 1014 | WP_065331055.1 | hypothetical protein | VF |
| PL336_RS19310 (PL336_19310) | 38637..39062 | - | 426 | WP_081285329.1 | hypothetical protein | - |
| PL336_RS19315 (PL336_19315) | 39071..39838 | - | 768 | WP_065331054.1 | type IV secretion system protein | - |
| PL336_RS19320 (PL336_19320) | 39835..40941 | - | 1107 | WP_065331053.1 | lytic transglycosylase domain-containing protein | - |
| PL336_RS19325 (PL336_19325) | 40938..41147 | - | 210 | WP_065331052.1 | hypothetical protein | - |
| PL336_RS19330 (PL336_19330) | 41144..43537 | - | 2394 | WP_204353406.1 | Type IV secretion system protein virB4 | VF |
| PL336_RS19335 (PL336_19335) | 43512..43790 | - | 279 | WP_009574107.1 | VirB3 family type IV secretion system protein | - |
| PL336_RS19340 (PL336_19340) | 43806..44087 | - | 282 | WP_065331050.1 | TrbC/VirB2 family protein | - |
| PL336_RS19345 (PL336_19345) | 44104..44580 | - | 477 | WP_254694021.1 | lytic transglycosylase domain-containing protein | - |
| PL336_RS19350 (PL336_19350) | 44741..45055 | - | 315 | WP_008335576.1 | hypothetical protein | - |
| PL336_RS19355 (PL336_19355) | 45188..45765 | + | 578 | Protein_34 | hypothetical protein | - |
| PL336_RS19360 (PL336_19360) | 45759..45959 | - | 201 | WP_065331048.1 | hypothetical protein | - |
| PL336_RS19365 (PL336_19365) | 46038..46175 | - | 138 | Protein_36 | helix-turn-helix transcriptional regulator | - |
| PL336_RS19370 (PL336_19370) | 46536..47735 | - | 1200 | WP_009804213.1 | 3-oxoadipyl-CoA thiolase | - |
| PL336_RS19375 (PL336_19375) | 47738..48658 | - | 921 | WP_009804214.1 | FAD-binding protein | - |
| PL336_RS19380 (PL336_19380) | 48658..49416 | - | 759 | WP_009804215.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| PL336_RS19385 (PL336_19385) | 49493..50248 | - | 756 | WP_009804216.1 | Cyclopentanol dehydrogenase | VF |
| PL336_RS19390 (PL336_19390) | 50321..51958 | - | 1638 | WP_009804217.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PL336_RS19395 (PL336_19395) | 52074..52976 | - | 903 | WP_017468330.1 | Monoterpene epsilon-lactone hydrolase | VF |
| PL336_RS19400 (PL336_19400) | 53264..54291 | + | 1028 | Protein_43 | IS110 family transposase ISMdi12 | Transposase |
| PL336_RS19405 (PL336_19405) | 54616..55379 | + | 764 | Protein_44 | IS5 family transposase ISPko1 | Transposase |
| PL336_RS19410 (PL336_19410) | 55352..57391 | - | 2040 | WP_037930989.1 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | - |
| PL336_RS19415 (PL336_19415) | 57400..58854 | - | 1455 | WP_224769585.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| PL336_RS19420 (PL336_19420) | 59026..59820 | + | 795 | WP_037930983.1 | IclR family transcriptional regulator | - |
| PL336_RS19425 (PL336_19425) | 59836..60996 | + | 1161 | WP_037930980.1 | acyl-CoA dehydrogenase family protein | - |
| PL336_RS19430 (PL336_19430) | 61015..62169 | + | 1155 | WP_037930977.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| PL336_RS19435 (PL336_19435) | 62169..63371 | + | 1203 | WP_037930974.1 | CoA transferase | - |
| PL336_RS19440 (PL336_19440) | 63424..64305 | + | 882 | WP_227511477.1 | Right origin-binding protein | VF |
| PL336_RS19445 (PL336_19445) | 64379..64837 | + | 459 | WP_007120589.1 | acyl-CoA thioesterase | - |
| PL336_RS19450 (PL336_19450) | 64987..67158 | + | 2172 | WP_009804227.1 | ParB/RepB/Spo0J family partition protein | - |
| PL336_RS19455 (PL336_19455) | 67285..67665 | + | 381 | WP_009804228.1 | DUF3768 domain-containing protein | - |
| PL336_RS19460 (PL336_19460) | 67782..68078 | + | 297 | WP_009804229.1 | hypothetical protein | - |
| PL336_RS19465 (PL336_19465) | 68159..68542 | + | 384 | WP_009804230.1 | hypothetical protein | - |
| PL336_RS19470 (PL336_19470) | 68544..69020 | + | 477 | WP_037930962.1 | hypothetical protein | - |
| PL336_RS19475 (PL336_19475) | 69126..69755 | + | 630 | WP_037931030.1 | hypothetical protein | - |
| PL336_RS19480 (PL336_19480) | 70271..74668 | + | 4398 | WP_037930959.1 | strawberry notch family protein | - |
| PL336_RS19485 (PL336_19485) | 74665..75711 | + | 1047 | WP_064225045.1 | toprim domain-containing protein | - |
| PL336_RS19490 (PL336_19490) | 76010..76921 | + | 912 | WP_064225044.1 | DUF2493 domain-containing protein | - |
| PL336_RS19495 (PL336_19495) | 76930..77223 | - | 294 | WP_064225043.1 | helix-turn-helix domain-containing protein | - |
| PL336_RS19500 (PL336_19500) | 77220..77561 | - | 342 | WP_064225051.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PL336_RS19505 (PL336_19505) | 78212..78550 | + | 339 | WP_065331090.1 | DUF736 family protein | - |
| PL336_RS19510 (PL336_19510) | 79044..80255 | + | 1212 | WP_064225041.1 | Sporulation initiation inhibitor protein Soj | VF |
| PL336_RS19515 (PL336_19515) | 80359..81354 | + | 996 | WP_064225040.1 | plasmid partitioning protein RepB | - |
| PL336_RS19520 (PL336_19520) | 81515..82795 | + | 1281 | WP_065331089.1 | plasmid replication protein RepC | - |
| PL336_RS19525 (PL336_19525) | 82851..83108 | + | 258 | WP_064225038.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PL336_RS19530 (PL336_19530) | 83105..83440 | + | 336 | WP_064225037.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PL336_RS19535 (PL336_19535) | 83447..84562 | - | 1116 | WP_065331088.1 | tyrosine-type recombinase/integrase | - |
| PL336_RS19540 (PL336_19540) | 84719..85603 | + | 885 | WP_065331087.1 | DUF1403 family protein | - |
| PL336_RS19545 (PL336_19545) | 85606..86220 | + | 615 | WP_065331086.1 | SMC-Scp complex subunit ScpB | - |
| PL336_RS19550 (PL336_19550) | 86626..87090 | + | 465 | WP_065331085.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PL336_RS19555 (PL336_19555) | 87087..87662 | + | 576 | WP_065331084.1 | PIN domain-containing protein | Toxin Detail |
| PL336_RS19560 (PL336_19560) | 87782..87937 | - | 156 | Protein_75 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| PL336_RS19565 (PL336_19565) | 88035..88400 | + | 366 | WP_065331083.1 | IS66 family transposase ISAzs18 | Transposase |
| PL336_RS19570 (PL336_19570) | 88397..88744 | + | 348 | WP_017467473.1 | IS66 family transposase ISCro1 | Transposase |
| PL336_RS19575 (PL336_19575) | 88814..90517 | + | 1704 | WP_065331082.1 | IS66 family transposase ISCARN48 | Transposase |
| PL336_RS19580 (PL336_19580) | 90550..90879 | + | 330 | WP_017467358.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PL336_RS19585 (PL336_19585) | 90939..91280 | - | 342 | WP_065331081.1 | hypothetical protein | - |
| PL336_RS19590 (PL336_19590) | 91296..91424 | - | 129 | WP_007120576.1 | hypothetical protein | - |
| PL336_RS19595 (PL336_19595) | 91683..93056 | - | 1374 | WP_040701702.1 | aspartate aminotransferase family protein | - |
| PL336_RS19600 (PL336_19600) | 93608..94570 | + | 963 | WP_065331080.1 | Transcriptional activator NphR | VF |
| PL336_RS19605 (PL336_19605) | 94658..96685 | + | 2028 | WP_007120579.1 | hydantoinase/oxoprolinase family protein | - |
| PL336_RS19610 (PL336_19610) | 96690..98645 | + | 1956 | WP_065331079.1 | hydantoinase B/oxoprolinase family protein | - |
| PL336_RS19615 (PL336_19615) | 98729..99469 | + | 741 | WP_007120581.1 | ABC transporter ATP-binding protein | - |
| PL336_RS19620 (PL336_19620) | 99469..100203 | + | 735 | WP_007120582.1 | ABC transporter ATP-binding protein | - |
| PL336_RS19625 (PL336_19625) | 100200..100598 | + | 399 | WP_227511481.1 | hypothetical protein | - |
| PL336_RS19630 (PL336_19630) | 100612..101418 | - | 807 | WP_227511480.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| PL336_RS19635 (PL336_19635) | 101408..102238 | - | 831 | WP_065331078.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| PL336_RS19640 (PL336_19640) | 102485..103066 | - | 582 | WP_227511479.1 | plasmid pRiA4b ORF-3 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|