MGE detailed information
MGE type: Genomic_island MGE length: 40909 bp
Accession: NZ_CP116411 Location: 2388591..2429499 Organism: Escherichia coli strain HH45 Replicon: chromosome
Accession: NZ_CP116411 Location: 2388591..2429499 Organism: Escherichia coli strain HH45 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL330_RS11345 (2383901) | 2383901..2384587 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| PL330_RS11350 (2384676) | 2384676..2385422 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| PL330_RS11355 (2385559) | 2385559..2387604 | + | 2046 | WP_001295662.1 | peptidyl-dipeptidase Dcp | - |
| PL330_RS11360 (2387649) | 2387649..2387729 | - | 81 | Protein_2222 | hypothetical protein | - |
| PL330_RS11365 (2388015) | 2388015..2388336 | + | 322 | Protein_2223 | TIGR00156 family protein | - |
| PL330_RS11370 (2388591) | 2388591..2389481 | + | 891 | WP_000592827.1 | diguanylate cyclase DgcZ | - |
| PL330_RS11375 (2389596) | 2389596..2389700 | - | 105 | WP_211180496.1 | protein MgtT | - |
| PL330_RS11380 (2389700) | 2389700..2389795 | - | 96 | WP_000901367.1 | protein MgtS | - |
| PL330_RS11385 (2389922) | 2389922..2391109 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| PL330_RS11390 (2391304) | 2391304..2392203 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| PL330_RS11395 (2392248) | 2392248..2392946 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| PL330_RS11400 (2393145) | 2393145..2393456 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| PL330_RS11405 (2393571) | 2393571..2394893 | + | 1323 | WP_001347941.1 | PTS sugar transporter subunit IIC | - |
| PL330_RS11410 (2394921) | 2394921..2395232 | + | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| PL330_RS11415 (2395288) | 2395288..2396961 | + | 1674 | WP_044059886.1 | carbohydrate porin | - |
| PL330_RS11420 (2396986) | 2396986..2398425 | + | 1440 | WP_000012613.1 | 6-phospho-beta-glucosidase | - |
| PL330_RS11425 (2398482) | 2398482..2398700 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| PL330_RS11430 (2398732) | 2398732..2399115 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| PL330_RS11435 (2399135) | 2399135..2399569 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| PL330_RS11440 (2399781) | 2399781..2400446 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| PL330_RS11445 (2400471) | 2400471..2401661 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| PL330_RS11450 (2401811) | 2401811..2402923 | - | 1113 | Protein_2240 | putative protein YneK | - |
| PL330_RS11455 (2403001) | 2403001..2403882 | - | 882 | WP_000366496.1 | HTH-type transcriptional regulator GltR | VF |
| PL330_RS11460 (2403983) | 2403983..2405371 | + | 1389 | WP_001315516.1 | succinate-semialdehyde dehydrogenase | - |
| PL330_RS11465 (2405435) | 2405435..2406361 | + | 927 | WP_000257409.1 | glutaminase B | - |
| PL330_RS11470 (2406361) | 2406361..2406720 | + | 360 | WP_115417563.1 | DUF4186 domain-containing protein | - |
| PL330_RS11475 (2406859) | 2406859..2408277 | + | 1419 | WP_000558044.1 | diguanylate cyclase | - |
| PL330_RS11480 (2408504) | 2408504..2409955 | + | 1452 | WP_000854624.1 | tagaturonate reductase | - |
| PL330_RS11485 (2410162) | 2410162..2411076 | + | 915 | WP_000637082.1 | bestrophin family protein | - |
| PL330_RS11490 (2411080) | 2411080..2411838 | - | 759 | WP_001286565.1 | Trans-aconitate 2-methyltransferase | VF |
| PL330_RS11495 (2411895) | 2411895..2411957 | - | 63 | Protein_2249 | autoinducer-2 (AI-2) modifying protein LsrG | - |
| PL330_RS11500 (2412146) | 2412146..2412412 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| PL330_RS11505 (2412412) | 2412412..2413734 | + | 1323 | WP_001125470.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| PL330_RS11510 (2414046) | 2414046..2414254 | + | 209 | Protein_2252 | AraC family transcriptional regulator | - |
| PL330_RS11515 (2414686) | 2414686..2415249 | + | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| PL330_RS11520 (2415610) | 2415610..2416320 | + | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| PL330_RS11525 (2416362) | 2416362..2419013 | + | 2652 | WP_024182845.1 | Outer membrane usher protein FimD | VF |
| PL330_RS11530 (2419027) | 2419027..2419557 | + | 531 | WP_000876776.1 | Protein FimF | VF |
| PL330_RS11535 (2419570) | 2419570..2420073 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| PL330_RS11540 (2420132) | 2420132..2421046 | + | 915 | WP_000520671.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| PL330_RS11545 (2421380) | 2421380..2423659 | + | 2280 | WP_000726696.1 | acid resistance putative oxidoreductase YdeP | - |
| PL330_RS11550 (2423907) | 2423907..2424104 | + | 198 | WP_115417569.1 | two-component system connector SafA | - |
| PL330_RS11555 (2424179) | 2424179..2424940 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| PL330_RS11560 (2425342) | 2425342..2427024 | + | 1683 | WP_001295684.1 | sulfatase | - |
| PL330_RS11565 (2427076) | 2427076..2428233 | + | 1158 | WP_271710637.1 | anaerobic sulfatase maturase | - |
| PL330_RS11570 (2428199) | 2428199..2428319 | - | 121 | Protein_2264 | hypothetical protein | - |
| PL330_RS11575 (2428336) | 2428336..2429499 | + | 1164 | Protein_2265 | insulinase family protein | - |
| PL330_RS11580 (2429861) | 2429861..2431261 | + | 1401 | WP_000358930.1 | glutamate decarboxylase | - |
| PL330_RS11585 (2431417) | 2431417..2432952 | + | 1536 | WP_000246019.1 | acid resistance gamma-aminobutyrate antiporter GadC | - |
| PL330_RS11590 (2433083) | 2433083..2434402 | + | 1320 | WP_000350356.1 | glycoside hydrolase family 10 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|