MGE detailed information
MGE type: Conjugative plasmid MGE length: 114684 bp
Accession: NZ_CP116410 Location: 1..114684 Organism: Escherichia coli strain HH97 Replicon: plasmid pHH97
Accession: NZ_CP116410 Location: 1..114684 Organism: Escherichia coli strain HH97 Replicon: plasmid pHH97
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL329_RS23920 (1) | 1..2263 | + | 2263 | Protein_0 | hypothetical protein | VF |
| PL329_RS23925 (2332) | 2332..3507 | + | 1176 | WP_271711336.1 | hypothetical protein | VF |
| PL329_RS23930 (4030) | 4030..4335 | - | 306 | Protein_2 | IS91 family transposase ISSbo1 | Transposase |
| PL329_RS23935 (4361) | 4361..4764 | + | 404 | Protein_3 | IS3 family transposase IS629 | Transposase |
| PL329_RS23940 (4829) | 4829..5584 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| PL329_RS23945 (5581) | 5581..7080 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| PL329_RS23950 (7166) | 7166..7516 | + | 351 | Protein_6 | IS3 family transposase IS629 | Transposase |
| PL329_RS23955 (8189) | 8189..8503 | + | 315 | Protein_7 | IS5 family transposase ISKpn26 | Transposase |
| PL329_RS23960 (8504) | 8504..8677 | + | 174 | Protein_8 | IS5 family transposase ISKpn26 | Transposase |
| PL329_RS23965 (8827) | 8827..9460 | - | 634 | Protein_9 | histidine-type phosphatase | - |
| PL329_RS23970 (9582) | 9582..10067 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| PL329_RS23975 (10092) | 10092..10577 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| PL329_RS23980 (10564) | 10564..11259 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PL329_RS23985 (11264) | 11264..12394 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| PL329_RS23990 (12384) | 12384..13667 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| PL329_RS23995 (13670) | 13670..15049 | - | 1380 | WP_182572950.1 | Fe-S-containing protein | - |
| PL329_RS24000 (15153) | 15153..15680 | - | 528 | WP_000178050.1 | iron transporter | - |
| PL329_RS24005 (15721) | 15721..17607 | - | 1887 | WP_001332815.1 | FTR1 family protein | - |
| PL329_RS24010 (17954) | 17954..18769 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| PL329_RS24015 (18952) | 18952..19458 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| PL329_RS24020 (19448) | 19448..19618 | - | 171 | Protein_20 | DsbA family protein | - |
| PL329_RS24025 (19705) | 19705..20409 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| PL329_RS24030 (21465) | 21465..22322 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| PL329_RS24035 (22315) | 22315..22389 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| PL329_RS24040 (22622) | 22622..22882 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| PL329_RS24045 (23122) | 23122..23712 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| PL329_RS24050 (23750) | 23750..23959 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| PL329_RS24055 (24005) | 24005..24466 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| PL329_RS24060 (24711) | 24711..24923 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| PL329_RS24065 (25052) | 25052..25612 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| PL329_RS24070 (25715) | 25715..26575 | - | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| PL329_RS24075 (26634) | 26634..27380 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| PL329_RS24080 (27400) | 27400..32670 | - | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| PL329_RS24085 (32670) | 32670..34814 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| PL329_RS24090 (34865) | 34865..35602 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| PL329_RS24095 (35805) | 35805..36536 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| PL329_RS24100 (36585) | 36585..37070 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| PL329_RS24105 (37086) | 37086..39908 | - | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PL329_RS24110 (39905) | 39905..41278 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| PL329_RS24115 (41265) | 41265..41657 | - | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| PL329_RS24120 (41638) | 41638..41985 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| PL329_RS24125 (41915) | 41915..42460 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PL329_RS24130 (42447) | 42447..42731 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PL329_RS24135 (42812) | 42812..43147 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| PL329_RS24140 (43128) | 43128..43469 | - | 342 | WP_271711337.1 | conjugal transfer protein TrbA | - |
| PL329_RS24145 (43482) | 43482..44048 | - | 567 | Protein_45 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PL329_RS24150 (44257) | 44257..44488 | - | 232 | Protein_46 | conjugal transfer protein TrbE | - |
| PL329_RS24155 (44514) | 44514..46372 | - | 1859 | Protein_47 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PL329_RS24160 (46369) | 46369..47001 | - | 633 | Protein_48 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PL329_RS24165 (47010) | 47010..47315 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| PL329_RS24170 (47345) | 47345..48337 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| PL329_RS24175 (48334) | 48334..48948 | - | 615 | Protein_51 | type-F conjugative transfer system protein TraW | - |
| PL329_RS24180 (48958) | 48958..49343 | - | 386 | Protein_52 | type-F conjugative transfer system protein TrbI | - |
| PL329_RS24185 (49340) | 49340..51960 | - | 2621 | Protein_53 | type IV secretion system protein TraC | - |
| PL329_RS24190 (52082) | 52082..52294 | - | 213 | Protein_54 | hypothetical protein | - |
| PL329_RS24195 (52322) | 52322..52539 | - | 218 | Protein_55 | hypothetical protein | - |
| PL329_RS24200 (52619) | 52619..53092 | - | 474 | Protein_56 | hypothetical protein | - |
| PL329_RS24205 (53085) | 53085..53306 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| PL329_RS24210 (53441) | 53441..53955 | - | 515 | Protein_58 | type IV conjugative transfer system lipoprotein TraV | - |
| PL329_RS24215 (53952) | 53952..54204 | - | 253 | Protein_59 | conjugal transfer protein TrbG | - |
| PL329_RS24220 (54197) | 54197..54517 | - | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| PL329_RS24225 (54504) | 54504..55086 | - | 583 | Protein_61 | conjugal transfer protein TraP | - |
| PL329_RS24230 (55076) | 55076..56483 | - | 1408 | Protein_62 | conjugal transfer protein TraB | - |
| PL329_RS24235 (56483) | 56483..57210 | - | 728 | Protein_63 | type-F conjugative transfer system secretin TraK | - |
| PL329_RS24240 (57197) | 57197..57288 | - | 92 | Protein_64 | type IV conjugative transfer system protein TraE | - |
| PL329_RS24245 (57333) | 57333..57637 | + | 305 | Protein_65 | TraE/TraK family type IV conjugative transfer system protein | - |
| PL329_RS24250 (57693) | 57693..58259 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| PL329_RS24255 (58281) | 58281..58592 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| PL329_RS24260 (58607) | 58607..58966 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| PL329_RS24265 (59000) | 59000..59227 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| PL329_RS24270 (59320) | 59320..60005 | - | 686 | Protein_70 | PAS domain-containing protein | - |
| PL329_RS24275 (60199) | 60199..60582 | - | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PL329_RS24280 (60913) | 60913..61515 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| PL329_RS24285 (61811) | 61811..62631 | - | 821 | Protein_73 | DUF932 domain-containing protein | - |
| PL329_RS24290 (62750) | 62750..63037 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| PL329_RS24295 (63338) | 63338..63635 | + | 298 | Protein_75 | hypothetical protein | - |
| PL329_RS24300 (63953) | 63953..64078 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| PL329_RS24305 (64020) | 64020..64169 | - | 150 | Protein_77 | DUF5431 family protein | - |
| - (64176) | 64176..64375 | - | 200 | NuclAT_0 | - | - |
| - (64176) | 64176..64375 | - | 200 | NuclAT_0 | - | - |
| - (64176) | 64176..64375 | - | 200 | NuclAT_0 | - | - |
| - (64176) | 64176..64375 | - | 200 | NuclAT_0 | - | - |
| PL329_RS24310 (64343) | 64343..65106 | - | 764 | Protein_78 | plasmid SOS inhibition protein A | - |
| PL329_RS24315 (65103) | 65103..65537 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| PL329_RS24320 (65592) | 65592..67550 | - | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| PL329_RS24325 (67609) | 67609..67842 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| PL329_RS24330 (67899) | 67899..68426 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| PL329_RS24335 (68728) | 68728..69186 | + | 459 | WP_011478091.1 | hypothetical protein | - |
| PL329_RS24340 (69272) | 69272..69835 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| PL329_RS24345 (69882) | 69882..71243 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| PL329_RS24350 (71295) | 71295..71525 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| PL329_RS24355 (72488) | 72488..72679 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| PL329_RS24360 (72676) | 72676..73098 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| PL329_RS24365 (73145) | 73145..73570 | - | 426 | WP_001198903.1 | antirestriction protein | - |
| PL329_RS24370 (73986) | 73986..74756 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| PL329_RS24375 (74801) | 74801..75319 | - | 519 | WP_223364201.1 | DUF1380 family protein | - |
| PL329_RS24380 (75249) | 75249..75470 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| PL329_RS24385 (75471) | 75471..76153 | - | 683 | Protein_93 | DNA methylase | - |
| PL329_RS24390 (76229) | 76229..76540 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| PL329_RS24395 (76537) | 76537..76677 | - | 141 | Protein_95 | hypothetical protein | - |
| PL329_RS24400 (76781) | 76781..77953 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| PL329_RS24405 (77953) | 77953..78750 | + | 798 | WP_032191719.1 | IS21 family transposase IS21 | Transposase |
| PL329_RS24410 (78744) | 78744..79574 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| PL329_RS24415 (79993) | 79993..81213 | - | 1221 | WP_271711332.1 | ISL3 family transposase ISEc53 | Transposase |
| PL329_RS24420 (81232) | 81232..81750 | - | 519 | WP_271711333.1 | hypothetical protein | VF |
| PL329_RS24425 (81885) | 81885..82133 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| PL329_RS24430 (82130) | 82130..82567 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PL329_RS24435 (82567) | 82567..83837 | + | 1271 | Protein_103 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PL329_RS24440 (83842) | 83842..84234 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| PL329_RS24445 (84239) | 84239..85210 | - | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| PL329_RS24450 (85439) | 85439..86083 | + | 645 | WP_271711334.1 | AAA family ATPase | - |
| PL329_RS24455 (86077) | 86077..86352 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| PL329_RS24460 (86491) | 86491..87300 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| PL329_RS24465 (87301) | 87301..87606 | - | 306 | WP_271711335.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PL329_RS24470 (87608) | 87608..87826 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PL329_RS24475 (90147) | 90147..90788 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| PL329_RS24480 (91963) | 91963..92940 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| PL329_RS24485 (93183) | 93183..93923 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| PL329_RS24490 (94044) | 94044..94232 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| PL329_RS24495 (94599) | 94599..95768 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| PL329_RS24500 (95994) | 95994..96169 | - | 176 | Protein_116 | IS3 family transposase | - |
| PL329_RS24505 (96615) | 96615..96887 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| PL329_RS24510 (97424) | 97424..97848 | - | 425 | Protein_118 | IS3 family transposase IS2 | Transposase |
| PL329_RS24515 (98130) | 98130..100099 | + | 1970 | Protein_119 | Hemin receptor | VF |
| PL329_RS24520 (100106) | 100106..100897 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| PL329_RS24525 (100960) | 100960..101568 | - | 609 | Protein_121 | IS66 family transposase ISEc22 | Transposase |
| PL329_RS24530 (101636) | 101636..102418 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| PL329_RS24535 (102415) | 102415..103437 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| PL329_RS24540 (103523) | 103523..104468 | - | 946 | Protein_124 | IS66 family transposase ISEc8 | Transposase |
| PL329_RS24545 (104517) | 104517..104864 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| PL329_RS24550 (104861) | 104861..105265 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| PL329_RS24555 (105345) | 105345..105684 | - | 340 | Protein_127 | IS3 family transposase IS629 | Transposase |
| PL329_RS24560 (105768) | 105768..107276 | - | 1509 | WP_271711338.1 | group II intron reverse transcriptase/maturase | - |
| PL329_RS24565 (107949) | 107949..108688 | - | 740 | Protein_129 | IS3 family transposase IS629 | Transposase |
| PL329_RS24570 (108790) | 108790..109050 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| PL329_RS24575 (109047) | 109047..109556 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| PL329_RS24580 (109576) | 109576..109923 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| PL329_RS24585 (110052) | 110052..110387 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| PL329_RS24590 (111839) | 111839..112525 | + | 687 | Protein_134 | replication initiation protein | - |
| PL329_RS24595 (112857) | 112857..113732 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| PL329_RS24600 (113740) | 113740..114516 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|