MGE detailed information
MGE type: IScluster/Tn MGE length: 23946 bp
Accession: NZ_CP116408 Location: 42941..66886 Organism: Escherichia coli strain HH107 Replicon: plasmid pHH107-3
Accession: NZ_CP116408 Location: 42941..66886 Organism: Escherichia coli strain HH107 Replicon: plasmid pHH107-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL328_RS24750 (PL328_24750) | 39130..41325 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| PL328_RS24755 (PL328_24755) | 41660..42898 | - | 1239 | WP_015060485.1 | IS110 family transposase | - |
| PL328_RS24765 (PL328_24765) | 44809..45269 | - | 461 | Protein_41 | IS1 family transposase IS1X4 | Transposase |
| PL328_RS24770 (PL328_24770) | 45538..46293 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| PL328_RS24775 (PL328_24775) | 46827..46925 | + | 99 | Protein_43 | IS1 family transposase | - |
| PL328_RS24780 (PL328_24780) | 47212..48234 | - | 1023 | WP_016156516.1 | IS110 family transposase IS1618 | Transposase |
| PL328_RS24785 (PL328_24785) | 48453..49433 | + | 981 | WP_021570610.1 | IS5 family transposase ISKpn26 | Transposase |
| PL328_RS24790 (PL328_24790) | 49543..51069 | - | 1527 | WP_231392227.1 | diguanylate cyclase | - |
| PL328_RS24795 (PL328_24795) | 51217..52337 | - | 1121 | Protein_47 | IS3-like element ISSen4 family transposase | - |
| PL328_RS24800 (PL328_24800) | 52590..53015 | + | 426 | WP_016156520.1 | hypothetical protein | - |
| PL328_RS24805 (PL328_24805) | 53265..53486 | - | 222 | WP_001124949.1 | hypothetical protein | - |
| PL328_RS24810 (PL328_24810) | 53946..54014 | + | 69 | WP_228636870.1 | DUF4113 domain-containing protein | - |
| PL328_RS24815 (PL328_24815) | 54061..54840 | - | 780 | WP_225623106.1 | DsbA family protein | - |
| PL328_RS24820 (PL328_24820) | 54975..55445 | + | 471 | WP_016156522.1 | hypothetical protein | - |
| PL328_RS24825 (PL328_24825) | 55474..56171 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| PL328_RS24830 (PL328_24830) | 56282..57082 | - | 801 | WP_001515712.1 | hypothetical protein | - |
| PL328_RS24835 (PL328_24835) | 57796..58281 | + | 486 | WP_000045622.1 | conjugative transfer protein MobI(A/C) | - |
| PL328_RS24840 (PL328_24840) | 58278..58643 | + | 366 | WP_001515713.1 | hypothetical protein | - |
| PL328_RS24845 (PL328_24845) | 58744..59724 | - | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| PL328_RS24850 (PL328_24850) | 59957..60106 | + | 150 | WP_232482723.1 | recombinase family protein | - |
| PL328_RS24855 (PL328_24855) | 60153..60857 | + | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| PL328_RS24860 (PL328_24860) | 60994..61806 | + | 813 | WP_265894992.1 | hypothetical protein | - |
| PL328_RS24865 (PL328_24865) | 61843..62262 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PL328_RS24870 (PL328_24870) | 62259..62570 | - | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| PL328_RS24875 (PL328_24875) | 62800..65808 | - | 3009 | WP_000718520.1 | Tn3 family transposase ISEc63 | Transposase |
| PL328_RS24880 (PL328_24880) | 65967..66128 | + | 162 | Protein_64 | recombinase family protein | - |
| PL328_RS24885 (PL328_24885) | 66182..66886 | - | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| PL328_RS24890 (PL328_24890) | 66877..68181 | + | 1305 | WP_227164542.1 | Y-family DNA polymerase | - |
| PL328_RS24895 (PL328_24895) | 68260..68511 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| PL328_RS24900 (PL328_24900) | 68565..68870 | + | 306 | WP_016156495.1 | hypothetical protein | - |
| PL328_RS24905 (PL328_24905) | 69981..70952 | - | 972 | WP_016156498.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|